GCA_000162315.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

GG704614.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	RiPP-like	3,783	15,945

GG704610.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	RiPP-like	95,054	105,989

GG704607.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	RiPP-like	10,537	26,020	gassericin T	RiPP	44%

Region	Type	From	To	Most similar known cluster	Similarity
Region 38.1	RiPP-like	3,783	15,945
Region 42.1	RiPP-like	95,054	105,989
Region 45.1	RiPP-like	10,537	26,020	gassericin T	RiPP	44%

No secondary metabolite regions were found in these records:: GG704651.1; GG704650.1; GG704649.1; GG704648.1; GG704647.1; GG704646.1; GG704645.1; GG704644.1; GG704643.1; GG704642.1; GG704641.1; GG704640.1; GG704639.1; GG704638.1; GG704637.1; GG704636.1; GG704635.1; GG704634.1; GG704633.1; GG704632.1; GG704631.1; GG704630.1; GG704629.1; GG704628.1; GG704627.1; GG704626.1; GG704625.1; GG704624.1; GG704623.1; GG704622.1; GG704621.1; GG704620.1; GG704619.1; GG704618.1; GG704617.1; GG704616.1; GG704615.1; GG704613.1; GG704612.1; GG704611.1; GG704609.1; GG704608.1; GG704606.1

Compact view

GG704614.1 - Region 1 - RiPP-like

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Location: 3,783 - 15,945 nt. (total: 12,163 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

GG704610.1 - Region 1 - RiPP-like

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Location: 95,054 - 105,989 nt. (total: 10,936 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

GG704607.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 10,537 - 26,020 nt. (total: 15,484 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters