GCA_000300215.1 - 2 region(s)

Identified primary metabolite regions

AMPM01000037.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 37.1	Pyruvate2acetate-formate	SCFA	1	7,829	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

AMPM01000166.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 162.1	Others_HGD_unassigned	Putative	1	13,387

No primary metabolite regions were found in these records:: AMPM01000001.1; AMPM01000002.1; AMPM01000003.1; AMPM01000004.1; AMPM01000005.1; AMPM01000006.1; AMPM01000007.1; AMPM01000008.1; AMPM01000009.1; AMPM01000010.1; AMPM01000011.1; AMPM01000012.1; AMPM01000013.1; AMPM01000014.1; AMPM01000015.1; AMPM01000016.1; AMPM01000017.1; AMPM01000018.1; AMPM01000019.1; AMPM01000020.1; AMPM01000021.1; AMPM01000022.1; AMPM01000023.1; AMPM01000024.1; AMPM01000025.1; AMPM01000026.1; AMPM01000027.1; AMPM01000028.1; AMPM01000029.1; AMPM01000030.1; AMPM01000031.1; AMPM01000032.1; AMPM01000033.1; AMPM01000034.1; AMPM01000035.1; AMPM01000036.1; AMPM01000038.1; AMPM01000039.1; AMPM01000040.1; AMPM01000041.1; AMPM01000042.1; AMPM01000043.1; AMPM01000044.1; AMPM01000045.1; AMPM01000046.1; AMPM01000047.1; AMPM01000048.1; AMPM01000049.1; AMPM01000050.1; AMPM01000051.1; AMPM01000052.1; AMPM01000053.1; AMPM01000054.1; AMPM01000055.1; AMPM01000056.1; AMPM01000057.1; AMPM01000058.1; AMPM01000059.1; AMPM01000060.1; AMPM01000061.1; AMPM01000062.1; AMPM01000063.1; AMPM01000064.1; AMPM01000065.1; AMPM01000066.1; AMPM01000067.1; AMPM01000068.1; AMPM01000069.1; AMPM01000070.1; AMPM01000071.1; AMPM01000072.1; AMPM01000073.1; AMPM01000074.1; AMPM01000075.1; AMPM01000076.1; AMPM01000077.1; AMPM01000078.1; AMPM01000080.1; AMPM01000081.1; AMPM01000082.1; AMPM01000083.1; AMPM01000084.1; AMPM01000085.1; AMPM01000086.1; AMPM01000087.1; AMPM01000088.1; AMPM01000089.1; AMPM01000090.1; AMPM01000091.1; AMPM01000092.1; AMPM01000093.1; AMPM01000094.1; AMPM01000095.1; AMPM01000096.1; AMPM01000097.1; AMPM01000098.1; AMPM01000099.1; AMPM01000100.1; AMPM01000101.1; AMPM01000102.1; AMPM01000103.1; AMPM01000104.1; AMPM01000105.1; AMPM01000106.1; AMPM01000107.1; AMPM01000108.1; AMPM01000109.1; AMPM01000110.1; AMPM01000111.1; AMPM01000112.1; AMPM01000113.1; AMPM01000114.1; AMPM01000116.1; AMPM01000117.1; AMPM01000118.1; AMPM01000119.1; AMPM01000120.1; AMPM01000121.1; AMPM01000122.1; AMPM01000123.1; AMPM01000124.1; AMPM01000125.1; AMPM01000126.1; AMPM01000129.1; AMPM01000130.1; AMPM01000131.1; AMPM01000132.1; AMPM01000133.1; AMPM01000134.1; AMPM01000135.1; AMPM01000136.1; AMPM01000137.1; AMPM01000138.1; AMPM01000139.1; AMPM01000140.1; AMPM01000141.1; AMPM01000142.1; AMPM01000143.1; AMPM01000144.1; AMPM01000145.1; AMPM01000146.1; AMPM01000147.1; AMPM01000148.1; AMPM01000149.1; AMPM01000150.1; AMPM01000151.1; AMPM01000152.1; AMPM01000153.1; AMPM01000154.1; AMPM01000155.1; AMPM01000156.1; AMPM01000157.1; AMPM01000158.1; AMPM01000159.1; AMPM01000160.1; AMPM01000161.1; AMPM01000162.1; AMPM01000163.1; AMPM01000164.1; AMPM01000165.1; AMPM01000167.1; AMPM01000168.1; AMPM01000169.1; AMPM01000170.1; AMPM01000171.1; AMPM01000172.1; AMPM01000173.1; AMPM01000175.1; AMPM01000176.1; AMPM01000177.1; AMPM01000178.1; AMPM01000179.1; AMPM01000180.1; AMPM01000181.1; AMPM01000182.1; AMPM01000183.1; AMPM01000184.1; AMPM01000185.1; AMPM01000186.1; AMPM01000187.1; AMPM01000189.1; AMPM01000190.1; AMPM01000191.1; AMPM01000192.1; AMPM01000193.1; AMPM01000194.1; AMPM01000196.1; AMPM01000197.1; AMPM01000198.1; AMPM01000200.1; AMPM01000201.1; AMPM01000202.1; AMPM01000203.1; AMPM01000204.1; AMPM01000205.1; AMPM01000206.1; AMPM01000207.1; AMPM01000208.1; AMPM01000209.1; AMPM01000210.1; AMPM01000211.1; AMPM01000212.1; AMPM01000213.1; AMPM01000214.1; AMPM01000215.1; AMPM01000216.1; AMPM01000217.1; AMPM01000218.1; AMPM01000219.1; AMPM01000220.1; AMPM01000221.1; AMPM01000223.1; AMPM01000224.1; AMPM01000225.1; AMPM01000226.1; AMPM01000227.1; AMPM01000228.1; AMPM01000229.1; AMPM01000230.1; AMPM01000231.1; AMPM01000232.1; AMPM01000233.1; AMPM01000234.1; AMPM01000235.1; AMPM01000236.1; AMPM01000237.1; AMPM01000239.1; AMPM01000241.1; AMPM01000242.1; AMPM01000243.1; AMPM01000244.1; AMPM01000245.1; AMPM01000246.1; AMPM01000247.1; AMPM01000248.1; AMPM01000249.1; AMPM01000251.1; AMPM01000252.1; AMPM01000253.1; AMPM01000254.1; AMPM01000255.1; AMPM01000256.1; AMPM01000257.1; AMPM01000259.1; AMPM01000260.1; AMPM01000261.1; AMPM01000262.1; AMPM01000263.1; AMPM01000264.1; AMPM01000265.1; AMPM01000266.1; AMPM01000269.1; AMPM01000270.1; AMPM01000271.1; AMPM01000272.1; AMPM01000273.1; AMPM01000274.1; AMPM01000275.1; AMPM01000276.1; AMPM01000277.1; AMPM01000280.1; AMPM01000281.1; AMPM01000282.1; AMPM01000284.1; AMPM01000285.1; AMPM01000286.1; AMPM01000287.1; AMPM01000289.1; AMPM01000290.1; AMPM01000291.1; AMPM01000292.1; AMPM01000293.1; AMPM01000295.1; AMPM01000296.1; AMPM01000297.1; AMPM01000299.1; AMPM01000300.1; AMPM01000301.1; AMPM01000302.1; AMPM01000303.1; AMPM01000304.1; AMPM01000305.1; AMPM01000306.1; AMPM01000308.1; AMPM01000309.1; AMPM01000310.1; AMPM01000312.1; AMPM01000313.1; AMPM01000314.1; AMPM01000315.1; AMPM01000316.1; AMPM01000317.1; AMPM01000318.1; AMPM01000319.1; AMPM01000320.1; AMPM01000321.1; AMPM01000322.1; AMPM01000323.1; AMPM01000324.1; AMPM01000326.1; AMPM01000327.1; AMPM01000328.1; AMPM01000329.1; AMPM01000330.1; AMPM01000331.1; AMPM01000332.1; AMPM01000333.1; AMPM01000336.1; AMPM01000337.1; AMPM01000338.1; AMPM01000339.1; AMPM01000341.1; AMPM01000342.1; AMPM01000343.1; AMPM01000344.1; AMPM01000345.1; AMPM01000346.1; AMPM01000348.1; AMPM01000349.1; AMPM01000350.1; AMPM01000351.1; AMPM01000352.1; AMPM01000353.1; AMPM01000354.1; AMPM01000356.1; AMPM01000357.1; AMPM01000358.1; AMPM01000359.1; AMPM01000364.1; AMPM01000365.1; AMPM01000366.1; AMPM01000367.1; AMPM01000368.1; AMPM01000369.1; AMPM01000370.1; AMPM01000371.1; AMPM01000372.1; AMPM01000373.1; AMPM01000374.1; AMPM01000375.1; AMPM01000376.1; AMPM01000378.1; AMPM01000379.1; AMPM01000381.1; AMPM01000382.1; AMPM01000383.1; AMPM01000384.1; AMPM01000385.1; AMPM01000386.1; AMPM01000387.1; AMPM01000388.1; AMPM01000390.1; AMPM01000391.1; AMPM01000394.1; AMPM01000395.1; AMPM01000396.1; AMPM01000398.1; AMPM01000400.1; AMPM01000401.1; AMPM01000402.1; AMPM01000404.1; AMPM01000405.1; AMPM01000409.1; AMPM01000410.1; AMPM01000411.1; AMPM01000413.1; AMPM01000414.1; AMPM01000415.1; AMPM01000416.1; AMPM01000417.1; AMPM01000419.1; AMPM01000422.1; AMPM01000424.1; AMPM01000425.1; AMPM01000426.1; AMPM01000429.1; AMPM01000431.1; AMPM01000433.1; AMPM01000434.1; AMPM01000436.1; AMPM01000437.1; AMPM01000439.1; AMPM01000440.1; AMPM01000441.1; AMPM01000442.1; AMPM01000448.1; AMPM01000449.1; AMPM01000450.1; AMPM01000451.1; AMPM01000453.1; AMPM01000454.1; AMPM01000456.1; AMPM01000457.1; AMPM01000459.1; AMPM01000460.1; AMPM01000462.1; AMPM01000465.1; AMPM01000466.1; AMPM01000469.1; AMPM01000471.1; AMPM01000477.1; AMPM01000479.1; AMPM01000481.1; AMPM01000485.1; AMPM01000492.1; AMPM01000496.1; AMPM01000499.1; AMPM01000504.1; AMPM01000506.1; AMPM01000516.1; AMPM01000527.1; AMPM01000541.1

Compact view

AMPM01000037.1 - Region 1 - Pyruvate2acetate-formate

Download region GenBank file

Location: 1 - 7,829 nt. (total: 7,829 nt) Show pHMM detection rules used

Region on contig edge.

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

AMPM01000166.1 - Region 1 - Others_HGD_unassigned

Download region GenBank file

Location: 1 - 13,387 nt. (total: 13,387 nt) Show pHMM detection rules used

Region on contig edge.

Others_HGD_unassigned: (minimum(1, [HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Lactoyl-CoA1, Lactoyl-CoA2]) and minimum(1, [ACP_syn_III, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AdoHcyase_NAD, AlaDh_PNT_C, BcrAD_BadFG, Biotin_lipoyl, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_6_Glutaconate, CoA_transf_3, ECH_1, ECH_2, ETF, ETF_alpha, FGGY_C, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, Mal_decarbox_Al, Peptidase_M22, Peptidase_M23, Thiolase_C, Thiolase_N, ketoacyl-synt]) and not (minimum(2, [AcetylCoA_hyd_C, BcrAD_BadFG, CoA_trans, CoA_trans_230_acto, Mal_decarbox_Al]) and Lactoyl-CoA2 and Lactoyl-CoA1) and not (minimum(4, [ACP_syn_III, ACP_syn_III_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, AlaDh_PNT_C, BcrAD_BadFG, ECH_1, ECH_2, ETF, ETF_alpha, HCDH, HCDH_N, Hacid_dh, Hacid_dh_C, IlvN, NAD_Gly3P_dh_N, Thiolase_C, Thiolase_N, ketoacyl-synt]) and HAAA1 and not HleuS1))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.