GCA_000309645.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

AFYN01000038.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 38.1	RiPP-like	44,202	52,896

AFYN01000039.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	RiPP-like	45,379	68,491

AFYN01000043.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	RiPP-like	1	8,080

Region	Type	From	To	Similarity
Region 38.1	RiPP-like	44,202	52,896
Region 39.1	RiPP-like	45,379	68,491
Region 43.1	RiPP-like	1	8,080

No secondary metabolite regions were found in these records:: AFYN01000001.1; AFYN01000002.1; AFYN01000003.1; AFYN01000004.1; AFYN01000005.1; AFYN01000006.1; AFYN01000007.1; AFYN01000008.1; AFYN01000009.1; AFYN01000010.1; AFYN01000011.1; AFYN01000012.1; AFYN01000013.1; AFYN01000014.1; AFYN01000015.1; AFYN01000016.1; AFYN01000017.1; AFYN01000018.1; AFYN01000019.1; AFYN01000020.1; AFYN01000021.1; AFYN01000022.1; AFYN01000023.1; AFYN01000024.1; AFYN01000025.1; AFYN01000026.1; AFYN01000027.1; AFYN01000028.1; AFYN01000029.1; AFYN01000030.1; AFYN01000031.1; AFYN01000032.1; AFYN01000033.1; AFYN01000034.1; AFYN01000035.1; AFYN01000036.1; AFYN01000037.1; AFYN01000040.1; AFYN01000041.1; AFYN01000042.1; AFYN01000044.1; AFYN01000045.1; AFYN01000046.1; AFYN01000047.1; AFYN01000048.1; AFYN01000050.1; AFYN01000051.1; AFYN01000052.1; AFYN01000053.1; AFYN01000054.1; AFYN01000055.1; AFYN01000056.1; AFYN01000057.1

Compact view

AFYN01000038.1 - Region 1 - RiPP-like

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Location: 44,202 - 52,896 nt. (total: 8,695 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

AFYN01000039.1 - Region 1 - RiPP-like

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Location: 45,379 - 68,491 nt. (total: 23,113 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

AFYN01000043.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 8,080 nt. (total: 8,080 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.