GCA_000309705.1 - 2 region(s)

Identified primary metabolite regions

AFYQ01000054.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 54.1	Pyruvate2acetate-formate	SCFA	84,881	108,125	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

AFYQ01000075.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 75.1	TPP_AA_metabolism	Putative	40,787	72,922

No primary metabolite regions were found in these records:: AFYQ01000001.1; AFYQ01000002.1; AFYQ01000003.1; AFYQ01000004.1; AFYQ01000005.1; AFYQ01000006.1; AFYQ01000007.1; AFYQ01000008.1; AFYQ01000009.1; AFYQ01000010.1; AFYQ01000011.1; AFYQ01000012.1; AFYQ01000013.1; AFYQ01000014.1; AFYQ01000015.1; AFYQ01000016.1; AFYQ01000017.1; AFYQ01000018.1; AFYQ01000019.1; AFYQ01000020.1; AFYQ01000021.1; AFYQ01000022.1; AFYQ01000023.1; AFYQ01000024.1; AFYQ01000025.1; AFYQ01000026.1; AFYQ01000027.1; AFYQ01000028.1; AFYQ01000029.1; AFYQ01000030.1; AFYQ01000031.1; AFYQ01000032.1; AFYQ01000033.1; AFYQ01000034.1; AFYQ01000035.1; AFYQ01000036.1; AFYQ01000037.1; AFYQ01000038.1; AFYQ01000039.1; AFYQ01000040.1; AFYQ01000041.1; AFYQ01000042.1; AFYQ01000043.1; AFYQ01000044.1; AFYQ01000045.1; AFYQ01000046.1; AFYQ01000047.1; AFYQ01000048.1; AFYQ01000049.1; AFYQ01000050.1; AFYQ01000051.1; AFYQ01000052.1; AFYQ01000053.1; AFYQ01000055.1; AFYQ01000056.1; AFYQ01000057.1; AFYQ01000058.1; AFYQ01000059.1; AFYQ01000060.1; AFYQ01000061.1; AFYQ01000062.1; AFYQ01000063.1; AFYQ01000064.1; AFYQ01000065.1; AFYQ01000066.1; AFYQ01000067.1; AFYQ01000068.1; AFYQ01000069.1; AFYQ01000070.1; AFYQ01000071.1; AFYQ01000072.1; AFYQ01000073.1; AFYQ01000074.1; AFYQ01000076.1; AFYQ01000077.1; AFYQ01000078.1; AFYQ01000079.1; AFYQ01000080.1; AFYQ01000081.1; AFYQ01000082.1; AFYQ01000083.1; AFYQ01000084.1; AFYQ01000085.1; AFYQ01000086.1; AFYQ01000087.1; AFYQ01000088.1; AFYQ01000089.1; AFYQ01000090.1; AFYQ01000091.1; AFYQ01000092.1; AFYQ01000093.1; AFYQ01000094.1; AFYQ01000095.1; AFYQ01000096.1; AFYQ01000097.1; AFYQ01000098.1; AFYQ01000099.1; AFYQ01000100.1; AFYQ01000101.1; AFYQ01000102.1; AFYQ01000103.1; AFYQ01000104.1; AFYQ01000105.1; AFYQ01000106.1; AFYQ01000107.1; AFYQ01000108.1; AFYQ01000109.1; AFYQ01000110.1; AFYQ01000111.1; AFYQ01000112.1; AFYQ01000113.1; AFYQ01000114.1; AFYQ01000115.1; AFYQ01000116.1

Compact view

AFYQ01000054.1 - Region 1 - Pyruvate2acetate-formate

Download region GenBank file

Location: 84,881 - 108,125 nt. (total: 23,245 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

AFYQ01000075.1 - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 40,787 - 72,922 nt. (total: 32,136 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.