GCA_000493335.1 - 1 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

HG531211.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 42.1	NRPS	1	6,855

Region	Type	From	To	Most similar known cluster	Similarity
Region 42.1	NRPS	1	6,855

No secondary metabolite regions were found in these records:: HG531170.1; HG531171.1; HG531172.1; HG531173.1; HG531174.1; HG531175.1; HG531176.1; HG531177.1; HG531178.1; HG531179.1; HG531180.1; HG531181.1; HG531182.1; HG531183.1; HG531184.1; HG531185.1; HG531186.1; HG531187.1; HG531188.1; HG531189.1; HG531190.1; HG531191.1; HG531192.1; HG531193.1; HG531194.1; HG531195.1; HG531196.1; HG531197.1; HG531198.1; HG531199.1; HG531200.1; HG531201.1; HG531202.1; HG531203.1; HG531204.1; HG531205.1; HG531206.1; HG531207.1; HG531208.1; HG531209.1; HG531210.1; HG531212.1; HG531213.1; HG531214.1; HG531215.1; HG531216.1; HG531217.1; HG531218.1; HG531219.1; HG531220.1; HG531221.1; HG531222.1; HG531223.1; HG531224.1; HG531225.1; HG531226.1; HG531227.1; HG531228.1; HG531229.1; HG531230.1; HG531231.1; HG531232.1; HG531233.1; HG531234.1; HG531235.1; HG531236.1; HG531237.1; HG531238.1; HG531239.1; HG531240.1; HG531241.1; HG531242.1; HG531243.1; HG531244.1; HG531245.1; HG531246.1; HG531247.1; HG531248.1; HG531249.1; HG531250.1; HG531251.1; HG531252.1; HG531253.1; HG531254.1; HG531255.1; HG531256.1; HG531257.1; HG531258.1; HG531259.1; HG531260.1; HG531261.1; HG531262.1; HG531263.1; HG531264.1; HG531265.1; HG531266.1; HG531267.1; HG531268.1; HG531269.1; HG531270.1; HG531271.1; HG531272.1; HG531273.1; HG531274.1; HG531275.1; HG531276.1; HG531277.1; HG531278.1; HG531279.1; HG531280.1; HG531281.1; HG531282.1; HG531283.1; HG531284.1; HG531285.1; HG531286.1; HG531287.1; HG531288.1; HG531289.1; HG531290.1; HG531291.1; HG531292.1; HG531293.1; HG531294.1; HG531295.1; HG531296.1; HG531297.1; HG531298.1; HG531299.1; HG531300.1; HG531301.1; HG531302.1; HG531303.1; HG531304.1; HG531305.1; HG531306.1; HG531307.1; HG531308.1; HG531309.1; HG531310.1; HG531311.1; HG531312.1; HG531313.1; HG531314.1; HG531315.1; HG531316.1; HG531317.1; HG531318.1; HG531319.1; HG531320.1; HG531321.1; HG531322.1; HG531323.1; HG531324.1; HG531325.1; HG531326.1; HG531327.1; HG531328.1; HG531329.1; HG531330.1; HG531331.1; HG531332.1; HG531333.1; HG531334.1; HG531335.1; HG531336.1; HG531337.1; HG531338.1; HG531339.1; HG531340.1; HG531341.1; HG531342.1; HG531343.1; HG531344.1; HG531345.1; HG531346.1; HG531347.1; HG531348.1; HG531349.1; HG531350.1; HG531351.1; HG531352.1; HG531353.1; HG531354.1; HG531355.1; HG531356.1; HG531357.1; HG531358.1; HG531359.1; HG531360.1

Compact view

HG531211.1 - Region 1 - NRPS

Download region GenBank file

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Location: 1 - 6,855 nt. (total: 6,855 nt) Show pHMM detection rules used

Region on contig edge.

NRPS: cds(Condensation and (AMP-binding or A-OX))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 1, location 0 - 6855:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (tyr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg42_1

Search NORINE for peptide: strict or relaxed

AMP-binding (8..390): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DvtSmAlVYK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 60% (weak)