GCA_000730125.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JNWB01000004.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RiPP-like	19,208	29,627

JNWB01000007.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 7.1	lanthipeptide-class-i	429	24,422

JNWB01000018.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 18.1	RiPP-like	76,981	87,373

JNWB01000030.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	NRPS-like	50,936	93,245	nosiheptide	RiPP:Thiopeptide	7%

Region	Type	From	To	Most similar known cluster	Similarity
Region 4.1	RiPP-like	19,208	29,627
Region 7.1	lanthipeptide-class-i	429	24,422
Region 18.1	RiPP-like	76,981	87,373
Region 29.1	NRPS-like	50,936	93,245	nosiheptide	RiPP:Thiopeptide	7%

No secondary metabolite regions were found in these records:: JNWB01000001.1; JNWB01000002.1; JNWB01000003.1; JNWB01000005.1; JNWB01000006.1; JNWB01000008.1; JNWB01000009.1; JNWB01000010.1; JNWB01000011.1; JNWB01000012.1; JNWB01000013.1; JNWB01000014.1; JNWB01000015.1; JNWB01000016.1; JNWB01000017.1; JNWB01000019.1; JNWB01000020.1; JNWB01000021.1; JNWB01000022.1; JNWB01000024.1; JNWB01000025.1; JNWB01000026.1; JNWB01000027.1; JNWB01000028.1; JNWB01000029.1; JNWB01000031.1; JNWB01000033.1; JNWB01000036.1; JNWB01000037.1; JNWB01000038.1

Compact view

JNWB01000004.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 19,208 - 29,627 nt. (total: 10,420 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

JNWB01000007.1 - Region 1 - lanthipeptide-class-i

Download region GenBank file

Download region SVG

Location: 429 - 24,422 nt. (total: 23,994 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

JNWB01000018.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 76,981 - 87,373 nt. (total: 10,393 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

JNWB01000030.1 - Region 1 - NRPS-like

Download region GenBank file

Download region SVG

Location: 50,936 - 93,245 nt. (total: 42,310 nt) Show pHMM detection rules used

NRPS-like: cds((PP-binding or NAD_binding_4) and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters