GCA_000771105.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JDTT01000020.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 49.1	RiPP-like	1,891	12,298
Region 49.2	lanthipeptide-class-iii,RRE-containing	33,431	63,087

JDTT01000008.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 108.1	RiPP-like	8,720	19,115

Region	Type	From	To	Similarity
Region 49.1	RiPP-like	1,891	12,298
Region 49.2	lanthipeptide-class-iii,RRE-containing	33,431	63,087
Region 108.1	RiPP-like	8,720	19,115

No secondary metabolite regions were found in these records:: JDTT01000001.1; JDTT01000100.1; JDTT01000101.1; JDTT01000103.1; JDTT01000104.1; JDTT01000105.1; JDTT01000106.1; JDTT01000107.1; JDTT01000108.1; JDTT01000109.1; JDTT01000011.1; JDTT01000110.1; JDTT01000111.1; JDTT01000112.1; JDTT01000113.1; JDTT01000114.1; JDTT01000115.1; JDTT01000116.1; JDTT01000117.1; JDTT01000118.1; JDTT01000119.1; JDTT01000012.1; JDTT01000120.1; JDTT01000121.1; JDTT01000122.1; JDTT01000123.1; JDTT01000124.1; JDTT01000125.1; JDTT01000126.1; JDTT01000127.1; JDTT01000128.1; JDTT01000129.1; JDTT01000013.1; JDTT01000130.1; JDTT01000131.1; JDTT01000132.1; JDTT01000133.1; JDTT01000134.1; JDTT01000135.1; JDTT01000136.1; JDTT01000137.1; JDTT01000138.1; JDTT01000014.1; JDTT01000015.1; JDTT01000016.1; JDTT01000017.1; JDTT01000018.1; JDTT01000019.1; JDTT01000021.1; JDTT01000022.1; JDTT01000024.1; JDTT01000025.1; JDTT01000026.1; JDTT01000027.1; JDTT01000028.1; JDTT01000029.1; JDTT01000030.1; JDTT01000031.1; JDTT01000032.1; JDTT01000033.1; JDTT01000034.1; JDTT01000035.1; JDTT01000036.1; JDTT01000037.1; JDTT01000038.1; JDTT01000039.1; JDTT01000004.1; JDTT01000040.1; JDTT01000041.1; JDTT01000042.1; JDTT01000044.1; JDTT01000046.1; JDTT01000047.1; JDTT01000048.1; JDTT01000049.1; JDTT01000005.1; JDTT01000050.1; JDTT01000051.1; JDTT01000052.1; JDTT01000053.1; JDTT01000054.1; JDTT01000055.1; JDTT01000056.1; JDTT01000057.1; JDTT01000058.1; JDTT01000059.1; JDTT01000006.1; JDTT01000060.1; JDTT01000061.1; JDTT01000062.1; JDTT01000063.1; JDTT01000064.1; JDTT01000065.1; JDTT01000066.1; JDTT01000067.1; JDTT01000068.1; JDTT01000069.1; JDTT01000007.1; JDTT01000070.1; JDTT01000072.1; JDTT01000073.1; JDTT01000074.1; JDTT01000076.1; JDTT01000077.1; JDTT01000078.1; JDTT01000079.1; JDTT01000080.1; JDTT01000081.1; JDTT01000082.1; JDTT01000084.1; JDTT01000085.1; JDTT01000086.1; JDTT01000087.1; JDTT01000088.1; JDTT01000009.1; JDTT01000090.1; JDTT01000091.1; JDTT01000092.1; JDTT01000093.1; JDTT01000094.1; JDTT01000095.1; JDTT01000097.1; JDTT01000098.1

Compact view

JDTT01000020.1 - Region 1 - RiPP-like

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Location: 1,891 - 12,298 nt. (total: 10,408 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

JDTT01000020.1 - Region 2 - RRE-containing,lanthipeptide-class-iii

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Location: 33,431 - 63,087 nt. (total: 29,657 nt) Show pHMM detection rules used

lanthipeptide-class-iii: (micKC and not PKS_KS)
RRE-containing: minimum(1, [Bottromycin_Methyltransferase_RRE, Cyanobactin_D_RRE, Cytolysin_C_RRE, Goadsporin_CD_RRE, Heterocycloanthracin_C_RRE, Lanthipeptide_LanB_RRE, Lasso_Fused_RRE, Mycofactocin_RRE, NHLP_CD_RRE, Other_Sactipeptide_rSAM_RRE, Pantocin_Microcin_RRE, Plantazolicin_C_RRE, PlpY_RRE, PqqD_RRE, Proteusin_Epimerase_RRE, Proteusin_Methyltransferase_RRE, Quinohemoprotein_rSAM_RRE, Ranthipeptide_rSAM_RRE, Stand_Alone_Lasso_RRE, Streptide_RRE, Subtilosin_rSAM_RRE, Thiaglutamate_B_RRE, Thiaglutamate_G_RRE, Thiaglutamate_I_RRE, Thiopeptide_F_RRE, Thuricin_rSAM_RRE, Thurincin_rSAM_RRE, Trifolitoxin_RRE])

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

No core peptides found.

JDTT01000008.1 - Region 1 - RiPP-like

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Location: 8,720 - 19,115 nt. (total: 10,396 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.