GCA_000801045.1 - 2 region(s)

Identified primary metabolite regions

JTDC01000011.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 11.1	Pyruvate2acetate-formate	SCFA	7,435	30,685	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

JTDC01000018.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 18.1	TPP_fatty_acids	Putative	22,485	48,359

No primary metabolite regions were found in these records:: JTDC01000001.1; JTDC01000002.1; JTDC01000003.1; JTDC01000004.1; JTDC01000005.1; JTDC01000006.1; JTDC01000007.1; JTDC01000008.1; JTDC01000009.1; JTDC01000010.1; JTDC01000012.1; JTDC01000013.1; JTDC01000014.1; JTDC01000015.1; JTDC01000016.1; JTDC01000017.1; JTDC01000019.1; JTDC01000020.1; JTDC01000021.1; JTDC01000022.1; JTDC01000023.1; JTDC01000024.1; JTDC01000025.1; JTDC01000026.1; JTDC01000027.1; JTDC01000028.1; JTDC01000029.1; JTDC01000030.1; JTDC01000031.1; JTDC01000032.1; JTDC01000033.1; JTDC01000034.1; JTDC01000035.1; JTDC01000036.1; JTDC01000037.1; JTDC01000038.1; JTDC01000039.1; JTDC01000040.1; JTDC01000041.1; JTDC01000042.1; JTDC01000043.1; JTDC01000044.1; JTDC01000045.1; JTDC01000046.1; JTDC01000047.1; JTDC01000048.1; JTDC01000049.1; JTDC01000050.1; JTDC01000051.1; JTDC01000052.1; JTDC01000053.1; JTDC01000054.1; JTDC01000055.1; JTDC01000056.1; JTDC01000057.1; JTDC01000058.1; JTDC01000059.1; JTDC01000060.1; JTDC01000061.1; JTDC01000062.1; JTDC01000063.1; JTDC01000064.1; JTDC01000065.1; JTDC01000066.1; JTDC01000067.1; JTDC01000068.1; JTDC01000069.1; JTDC01000070.1; JTDC01000071.1; JTDC01000072.1; JTDC01000073.1; JTDC01000074.1; JTDC01000075.1; JTDC01000076.1; JTDC01000077.1

Compact view

JTDC01000011.1 - Region 1 - Pyruvate2acetate-formate

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Location: 7,435 - 30,685 nt. (total: 23,251 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JTDC01000018.1 - Region 1 - TPP_fatty_acids

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Location: 22,485 - 48,359 nt. (total: 25,875 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.