GCA_000830675.1 - 6 region(s)

Identified primary metabolite regions

JXHM01000092.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 14.1	Fumarate2succinate	SCFA	1,018	23,542	Acetate to butyrate C. sporogenes	BUT	33%

JXHM01000120.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 40.1	TPP_AA_metabolism	Putative	29,518	52,809

JXHM01000020.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 43.1	fatty_acids-unassigned	Putative	71,864	95,100	Acetate to butyrate C. sporogenes	BUT	50%

JXHM01000125.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 49.1	hydroxybenzoate2phenol	Aromatic	6,591	28,629	hydroxybenzoate2phenol K. pneumoniae	PHE	100%

JXHM01000025.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 54.1	fatty_acids-unassigned	Putative	1,671	27,064	Acetate to butyrate C. sporogenes	BUT	33%

JXHM01000049.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 84.1	Nitrate_reductase,Putrescine2spermidine	Aliphatic_amine	2,955	48,993	Nitrate reductase E. coli	NIR	60%

No primary metabolite regions were found in these records:: JXHM01000001.1; JXHM01000010.1; JXHM01000082.1; JXHM01000083.1; JXHM01000011.1; JXHM01000085.1; JXHM01000086.1; JXHM01000087.1; JXHM01000088.1; JXHM01000012.1; JXHM01000089.1; JXHM01000090.1; JXHM01000091.1; JXHM01000093.1; JXHM01000013.1; JXHM01000094.1; JXHM01000095.1; JXHM01000097.1; JXHM01000098.1; JXHM01000099.1; JXHM01000014.1; JXHM01000100.1; JXHM01000101.1; JXHM01000015.1; JXHM01000105.1; JXHM01000106.1; JXHM01000016.1; JXHM01000107.1; JXHM01000108.1; JXHM01000109.1; JXHM01000111.1; JXHM01000017.1; JXHM01000114.1; JXHM01000018.1; JXHM01000115.1; JXHM01000116.1; JXHM01000019.1; JXHM01000118.1; JXHM01000121.1; JXHM01000002.1; JXHM01000122.1; JXHM01000021.1; JXHM01000123.1; JXHM01000022.1; JXHM01000124.1; JXHM01000126.1; JXHM01000023.1; JXHM01000024.1; JXHM01000128.1; JXHM01000129.1; JXHM01000026.1; JXHM01000130.1; JXHM01000027.1; JXHM01000131.1; JXHM01000028.1; JXHM01000029.1; JXHM01000133.1; JXHM01000003.1; JXHM01000030.1; JXHM01000031.1; JXHM01000032.1; JXHM01000033.1; JXHM01000034.1; JXHM01000035.1; JXHM01000036.1; JXHM01000037.1; JXHM01000038.1; JXHM01000039.1; JXHM01000004.1; JXHM01000040.1; JXHM01000041.1; JXHM01000042.1; JXHM01000043.1; JXHM01000044.1; JXHM01000045.1; JXHM01000046.1; JXHM01000047.1; JXHM01000048.1; JXHM01000005.1; JXHM01000050.1; JXHM01000051.1; JXHM01000052.1; JXHM01000053.1; JXHM01000054.1; JXHM01000055.1; JXHM01000056.1; JXHM01000057.1; JXHM01000058.1; JXHM01000006.1; JXHM01000059.1; JXHM01000060.1; JXHM01000061.1; JXHM01000062.1; JXHM01000063.1; JXHM01000064.1; JXHM01000065.1; JXHM01000007.1; JXHM01000066.1; JXHM01000067.1; JXHM01000068.1; JXHM01000069.1; JXHM01000008.1; JXHM01000071.1; JXHM01000072.1; JXHM01000074.1; JXHM01000009.1; JXHM01000075.1; JXHM01000076.1; JXHM01000078.1; JXHM01000079.1; JXHM01000080.1; JXHM01000081.1

Compact view

JXHM01000092.1 - Region 1 - Fumarate2succinate

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Location: 1,018 - 23,542 nt. (total: 22,525 nt) Show pHMM detection rules used

Fumarate2succinate: (Succ_DH_flav_C and FAD_binding_2 and (Fer2_3 or Fer4_7 or SucD_FumR))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JXHM01000120.1 - Region 1 - TPP_AA_metabolism

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Location: 29,518 - 52,809 nt. (total: 23,292 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

JXHM01000020.1 - Region 1 - fatty_acids-unassigned

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Location: 71,864 - 95,100 nt. (total: 23,237 nt) Show pHMM detection rules used

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JXHM01000125.1 - Region 1 - hydroxybenzoate2phenol

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Location: 6,591 - 28,629 nt. (total: 22,039 nt) Show pHMM detection rules used

hydroxybenzoate2phenol: (Flavoprotein and Phea_decarb and not ubi_syn)

Legend:

core biosynthetic genes

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transport-related genes

regulatory genes

resistance genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JXHM01000025.1 - Region 1 - fatty_acids-unassigned

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Location: 1,671 - 27,064 nt. (total: 25,394 nt) Show pHMM detection rules used

fatty_acids-unassigned: (not (EC1_2-faecali or baiH or baiCD or ECH1_Enoyl_CoA_DH1 or ECH1_Enoyl_CoA_DH2 or ECH1_Enoyl_CoA_DH3 or ECH1_Enoyl_CoA_DH4 or POR or POR_N or PFOR_II) and minimum(4, [AcetylCoA_hyd_C, Acyl-CoA_dh_1, Acyl-CoA_dh_2, EC1_2-faecali, ECH1_8_CARC, ECH_1, ECH_2, HBT, HCDH, HCDH_N, Thiolase_C, Thiolase_N, ketoacyl-synt]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JXHM01000049.1 - Region 1 - Nitrate_reductase,Putrescine2spermidine

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Location: 2,955 - 48,993 nt. (total: 46,039 nt) Show pHMM detection rules used

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))
Putrescine2spermidine: (minimum(2, [AdoMet_dc, Spermine_synt_N, Spermine_synth]) or (Orn_DAP_Arg_deC and Sacchrp_dh_C))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters