GCA_000966475.1 - 3 region(s)

Identified primary metabolite regions

JZSB01000008.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 8.1	Nitrate_reductase	E-MGC	92,132	118,603	Nitrate reductase E. coli	NIR	40%

JZSB01000015.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 15.1	Pyruvate2acetate-formate	SCFA	108,658	131,774	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

JZSB01000040.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 38.1	TPP_fatty_acids	Putative	1	8,238

No primary metabolite regions were found in these records:: JZSB01000001.1; JZSB01000002.1; JZSB01000003.1; JZSB01000004.1; JZSB01000005.1; JZSB01000006.1; JZSB01000007.1; JZSB01000009.1; JZSB01000010.1; JZSB01000011.1; JZSB01000012.1; JZSB01000013.1; JZSB01000014.1; JZSB01000016.1; JZSB01000017.1; JZSB01000018.1; JZSB01000019.1; JZSB01000020.1; JZSB01000021.1; JZSB01000022.1; JZSB01000023.1; JZSB01000024.1; JZSB01000025.1; JZSB01000026.1; JZSB01000027.1; JZSB01000029.1; JZSB01000030.1; JZSB01000031.1; JZSB01000032.1; JZSB01000033.1; JZSB01000034.1; KQ033852.1; JZSB01000037.1; JZSB01000038.1; JZSB01000039.1; JZSB01000042.1; JZSB01000043.1; KQ033853.1; JZSB01000046.1; JZSB01000047.1; JZSB01000048.1; JZSB01000049.1; JZSB01000050.1; JZSB01000051.1; JZSB01000052.1; KQ033854.1; JZSB01000055.1

Compact view

JZSB01000008.1 - Region 1 - Nitrate_reductase

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Location: 92,132 - 118,603 nt. (total: 26,472 nt) Show pHMM detection rules used

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JZSB01000015.1 - Region 1 - Pyruvate2acetate-formate

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Location: 108,658 - 131,774 nt. (total: 23,117 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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JZSB01000040.1 - Region 1 - TPP_fatty_acids

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Location: 1 - 8,238 nt. (total: 8,238 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.