GCA_001064785.1 - 3 region(s)

Identified primary metabolite regions

JVIZ01000227.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 28.1	Pyruvate2acetate-formate	SCFA	7,223	27,705	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

JVIZ01000067.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 204.1	gallic_acid_met	Aromatic	1	17,380	Gallic acid degradation B. sp. KLE	GALL	100%

JVIZ01000070.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 207.1	TPP_fatty_acids	Putative	1	11,019

No primary metabolite regions were found in these records:: JVIZ01000022.1; JVIZ01000195.1; JVIZ01000197.1; JVIZ01000023.1; JVIZ01000199.1; JVIZ01000201.1; JVIZ01000202.1; JVIZ01000203.1; JVIZ01000204.1; JVIZ01000205.1; JVIZ01000206.1; JVIZ01000207.1; JVIZ01000210.1; JVIZ01000211.1; JVIZ01000212.1; JVIZ01000213.1; JVIZ01000215.1; JVIZ01000216.1; JVIZ01000217.1; JVIZ01000218.1; JVIZ01000219.1; JVIZ01000221.1; JVIZ01000222.1; JVIZ01000223.1; JVIZ01000224.1; JVIZ01000225.1; JVIZ01000226.1; JVIZ01000228.1; JVIZ01000229.1; JVIZ01000024.1; JVIZ01000230.1; JVIZ01000231.1; JVIZ01000233.1; JVIZ01000234.1; JVIZ01000235.1; JVIZ01000236.1; JVIZ01000238.1; JVIZ01000239.1; JVIZ01000240.1; JVIZ01000241.1; JVIZ01000242.1; JVIZ01000244.1; JVIZ01000245.1; JVIZ01000246.1; JVIZ01000247.1; JVIZ01000248.1; JVIZ01000249.1; JVIZ01000250.1; JVIZ01000251.1; JVIZ01000253.1; JVIZ01000026.1; JVIZ01000256.1; JVIZ01000257.1; JVIZ01000258.1; JVIZ01000027.1; JVIZ01000260.1; JVIZ01000261.1; JVIZ01000264.1; JVIZ01000265.1; JVIZ01000267.1; JVIZ01000268.1; JVIZ01000269.1; JVIZ01000270.1; JVIZ01000271.1; JVIZ01000272.1; JVIZ01000273.1; JVIZ01000274.1; JVIZ01000029.1; JVIZ01000275.1; JVIZ01000276.1; JVIZ01000277.1; JVIZ01000278.1; JVIZ01000279.1; JVIZ01000030.1; JVIZ01000280.1; JVIZ01000281.1; JVIZ01000282.1; JVIZ01000285.1; JVIZ01000286.1; JVIZ01000287.1; JVIZ01000288.1; JVIZ01000289.1; JVIZ01000290.1; JVIZ01000291.1; JVIZ01000003.1; JVIZ01000293.1; JVIZ01000294.1; JVIZ01000295.1; JVIZ01000296.1; JVIZ01000297.1; JVIZ01000298.1; JVIZ01000032.1; JVIZ01000301.1; JVIZ01000302.1; JVIZ01000303.1; JVIZ01000304.1; JVIZ01000305.1; JVIZ01000306.1; JVIZ01000307.1; JVIZ01000308.1; JVIZ01000309.1; JVIZ01000310.1; JVIZ01000311.1; JVIZ01000312.1; JVIZ01000314.1; JVIZ01000315.1; JVIZ01000316.1; JVIZ01000034.1; JVIZ01000317.1; JVIZ01000318.1; JVIZ01000319.1; JVIZ01000320.1; JVIZ01000321.1; JVIZ01000322.1; JVIZ01000323.1; JVIZ01000324.1; JVIZ01000325.1; JVIZ01000326.1; JVIZ01000327.1; JVIZ01000328.1; JVIZ01000329.1; JVIZ01000330.1; JVIZ01000331.1; JVIZ01000332.1; JVIZ01000333.1; JVIZ01000334.1; JVIZ01000335.1; JVIZ01000336.1; JVIZ01000337.1; JVIZ01000338.1; JVIZ01000339.1; JVIZ01000340.1; JVIZ01000341.1; JVIZ01000342.1; JVIZ01000343.1; JVIZ01000344.1; JVIZ01000345.1; JVIZ01000346.1; JVIZ01000035.1; JVIZ01000347.1; JVIZ01000348.1; JVIZ01000349.1; JVIZ01000350.1; JVIZ01000351.1; JVIZ01000352.1; JVIZ01000354.1; JVIZ01000355.1; JVIZ01000356.1; JVIZ01000357.1; JVIZ01000358.1; JVIZ01000359.1; JVIZ01000360.1; JVIZ01000361.1; JVIZ01000362.1; JVIZ01000363.1; JVIZ01000364.1; JVIZ01000365.1; JVIZ01000366.1; JVIZ01000367.1; JVIZ01000369.1; JVIZ01000370.1; JVIZ01000371.1; JVIZ01000372.1; JVIZ01000373.1; JVIZ01000374.1; JVIZ01000375.1; JVIZ01000376.1; JVIZ01000378.1; JVIZ01000379.1; JVIZ01000380.1; JVIZ01000381.1; JVIZ01000383.1; JVIZ01000384.1; JVIZ01000386.1; JVIZ01000389.1; JVIZ01000391.1; JVIZ01000036.1; JVIZ01000037.1; JVIZ01000039.1; JVIZ01000040.1; JVIZ01000041.1; JVIZ01000042.1; JVIZ01000043.1; JVIZ01000044.1; JVIZ01000046.1; JVIZ01000047.1; JVIZ01000049.1; JVIZ01000050.1; JVIZ01000051.1; JVIZ01000052.1; JVIZ01000054.1; JVIZ01000055.1; JVIZ01000006.1; JVIZ01000056.1; JVIZ01000057.1; JVIZ01000058.1; JVIZ01000059.1; JVIZ01000060.1; JVIZ01000061.1; JVIZ01000063.1; JVIZ01000065.1; JVIZ01000066.1; JVIZ01000068.1; JVIZ01000069.1; JVIZ01000072.1; JVIZ01000073.1; JVIZ01000008.1; JVIZ01000074.1; JVIZ01000075.1; JVIZ01000076.1; JVIZ01000077.1; JVIZ01000079.1; JVIZ01000080.1; JVIZ01000081.1; JVIZ01000082.1; JVIZ01000084.1; JVIZ01000085.1; JVIZ01000086.1; JVIZ01000087.1; JVIZ01000088.1; JVIZ01000089.1; JVIZ01000009.1; JVIZ01000090.1; JVIZ01000091.1; JVIZ01000092.1; JVIZ01000093.1; JVIZ01000094.1; JVIZ01000096.1; JVIZ01000011.1; JVIZ01000098.1; JVIZ01000099.1; JVIZ01000100.1; JVIZ01000101.1; JVIZ01000102.1; JVIZ01000103.1; JVIZ01000104.1; JVIZ01000107.1; JVIZ01000108.1; JVIZ01000109.1; JVIZ01000110.1; JVIZ01000111.1; JVIZ01000112.1; JVIZ01000012.1; JVIZ01000114.1; JVIZ01000115.1; JVIZ01000116.1; JVIZ01000117.1; JVIZ01000013.1; JVIZ01000118.1; JVIZ01000120.1; JVIZ01000121.1; JVIZ01000122.1; JVIZ01000123.1; JVIZ01000124.1; JVIZ01000125.1; JVIZ01000126.1; JVIZ01000127.1; JVIZ01000129.1; JVIZ01000132.1; JVIZ01000015.1; JVIZ01000133.1; JVIZ01000016.1; JVIZ01000134.1; JVIZ01000136.1; JVIZ01000137.1; JVIZ01000139.1; JVIZ01000140.1; JVIZ01000141.1; JVIZ01000142.1; JVIZ01000143.1; JVIZ01000144.1; JVIZ01000145.1; JVIZ01000146.1; JVIZ01000147.1; JVIZ01000148.1; JVIZ01000149.1; JVIZ01000151.1; JVIZ01000152.1; JVIZ01000153.1; JVIZ01000018.1; JVIZ01000154.1; JVIZ01000155.1; JVIZ01000156.1; JVIZ01000159.1; JVIZ01000160.1; JVIZ01000161.1; JVIZ01000162.1; JVIZ01000020.1; JVIZ01000163.1; JVIZ01000166.1; JVIZ01000167.1; JVIZ01000168.1; JVIZ01000169.1; JVIZ01000170.1; JVIZ01000171.1; JVIZ01000172.1; JVIZ01000173.1; JVIZ01000174.1; JVIZ01000175.1; JVIZ01000001.1; JVIZ01000176.1; JVIZ01000177.1; JVIZ01000178.1; JVIZ01000179.1; JVIZ01000181.1; JVIZ01000182.1; JVIZ01000183.1; JVIZ01000184.1; JVIZ01000185.1; JVIZ01000186.1; JVIZ01000187.1; JVIZ01000188.1; JVIZ01000189.1; JVIZ01000190.1; JVIZ01000191.1; JVIZ01000192.1; JVIZ01000193.1; JVIZ01000002.1

Compact view

JVIZ01000227.1 - Region 1 - Pyruvate2acetate-formate

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Location: 7,223 - 27,705 nt. (total: 20,483 nt) Show pHMM detection rules used

Region on contig edge.

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JVIZ01000067.1 - Region 1 - gallic_acid_met

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Location: 1 - 17,380 nt. (total: 17,380 nt) Show pHMM detection rules used

Region on contig edge.

gallic_acid_met: (minimum(1, [Flavoprotein, Semialdhyde_dh]) and gallic_acid)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JVIZ01000070.1 - Region 1 - TPP_fatty_acids

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Location: 1 - 11,019 nt. (total: 11,019 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.