GCA_001067025.1 - 2 region(s)

Identified primary metabolite regions

JUWG01000104.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 65.1	Pyruvate2acetate-formate	SCFA	29,605	52,855	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

JUWG01000003.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 127.1	TPP_fatty_acids	Putative	1	11,118

No primary metabolite regions were found in these records:: JUWG01000034.1; JUWG01000035.1; JUWG01000036.1; JUWG01000037.1; JUWG01000038.1; JUWG01000039.1; JUWG01000041.1; JUWG01000042.1; JUWG01000043.1; JUWG01000044.1; JUWG01000004.1; JUWG01000045.1; JUWG01000046.1; JUWG01000047.1; JUWG01000049.1; JUWG01000051.1; JUWG01000052.1; JUWG01000053.1; JUWG01000005.1; JUWG01000056.1; JUWG01000058.1; JUWG01000060.1; JUWG01000006.1; JUWG01000061.1; JUWG01000063.1; JUWG01000065.1; JUWG01000067.1; JUWG01000068.1; JUWG01000069.1; JUWG01000070.1; JUWG01000072.1; JUWG01000073.1; JUWG01000074.1; JUWG01000075.1; JUWG01000076.1; JUWG01000077.1; JUWG01000078.1; JUWG01000079.1; JUWG01000080.1; JUWG01000007.1; JUWG01000081.1; JUWG01000082.1; JUWG01000083.1; JUWG01000084.1; JUWG01000008.1; JUWG01000085.1; JUWG01000087.1; JUWG01000088.1; JUWG01000089.1; JUWG01000090.1; JUWG01000009.1; JUWG01000091.1; JUWG01000092.1; JUWG01000093.1; JUWG01000094.1; JUWG01000010.1; JUWG01000097.1; JUWG01000098.1; JUWG01000099.1; JUWG01000100.1; JUWG01000101.1; JUWG01000011.1; JUWG01000102.1; JUWG01000103.1; JUWG01000105.1; JUWG01000107.1; JUWG01000108.1; JUWG01000109.1; JUWG01000110.1; JUWG01000111.1; JUWG01000112.1; JUWG01000012.1; JUWG01000113.1; JUWG01000114.1; JUWG01000116.1; JUWG01000117.1; JUWG01000118.1; JUWG01000119.1; JUWG01000120.1; JUWG01000121.1; JUWG01000122.1; JUWG01000123.1; JUWG01000124.1; JUWG01000125.1; JUWG01000128.1; JUWG01000013.1; JUWG01000130.1; JUWG01000131.1; JUWG01000132.1; JUWG01000134.1; JUWG01000135.1; JUWG01000137.1; JUWG01000138.1; JUWG01000140.1; JUWG01000141.1; JUWG01000142.1; JUWG01000146.1; JUWG01000147.1; JUWG01000148.1; JUWG01000149.1; JUWG01000151.1; JUWG01000153.1; JUWG01000154.1; JUWG01000155.1; JUWG01000156.1; JUWG01000157.1; JUWG01000158.1; JUWG01000160.1; JUWG01000161.1; JUWG01000162.1; JUWG01000163.1; JUWG01000164.1; JUWG01000165.1; JUWG01000166.1; JUWG01000016.1; JUWG01000017.1; JUWG01000018.1; JUWG01000020.1; JUWG01000022.1; JUWG01000023.1; JUWG01000024.1; JUWG01000025.1; JUWG01000026.1; JUWG01000027.1; JUWG01000030.1; JUWG01000031.1; JUWG01000032.1

Compact view

JUWG01000104.1 - Region 1 - Pyruvate2acetate-formate

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Location: 29,605 - 52,855 nt. (total: 23,251 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JUWG01000003.1 - Region 1 - TPP_fatty_acids

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Location: 1 - 11,118 nt. (total: 11,118 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.