GCA_001068015.1 - 3 region(s)

Identified primary metabolite regions

JULF01000090.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 142.1	gallic_acid_met	Aromatic	1	12,581	Gallic acid degradation B. sp. KLE	GALL	100%

JULF01000123.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 169.1	TPP_fatty_acids	Putative	20,034	35,998

JULF01000187.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 217.1	Pyruvate2acetate-formate	SCFA	7,243	30,493	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

No primary metabolite regions were found in these records:: JULF01000206.1; JULF01000207.1; JULF01000023.1; JULF01000210.1; JULF01000212.1; JULF01000213.1; JULF01000215.1; JULF01000216.1; JULF01000217.1; JULF01000218.1; JULF01000219.1; JULF01000223.1; JULF01000224.1; JULF01000225.1; JULF01000226.1; JULF01000227.1; JULF01000228.1; JULF01000229.1; JULF01000231.1; JULF01000024.1; JULF01000232.1; JULF01000025.1; JULF01000233.1; JULF01000234.1; JULF01000235.1; JULF01000236.1; JULF01000237.1; JULF01000240.1; JULF01000241.1; JULF01000242.1; JULF01000026.1; JULF01000027.1; JULF01000243.1; JULF01000244.1; JULF01000245.1; JULF01000246.1; JULF01000248.1; JULF01000250.1; JULF01000251.1; JULF01000252.1; JULF01000254.1; JULF01000028.1; JULF01000255.1; JULF01000256.1; JULF01000257.1; JULF01000258.1; JULF01000259.1; JULF01000261.1; JULF01000262.1; JULF01000263.1; JULF01000003.1; JULF01000264.1; JULF01000265.1; JULF01000270.1; JULF01000271.1; JULF01000272.1; JULF01000275.1; JULF01000276.1; JULF01000277.1; JULF01000278.1; JULF01000279.1; JULF01000280.1; JULF01000281.1; JULF01000283.1; JULF01000285.1; JULF01000287.1; JULF01000288.1; JULF01000289.1; JULF01000291.1; JULF01000292.1; JULF01000295.1; JULF01000296.1; JULF01000297.1; JULF01000298.1; JULF01000300.1; JULF01000301.1; JULF01000302.1; JULF01000303.1; JULF01000304.1; JULF01000305.1; JULF01000306.1; JULF01000307.1; JULF01000309.1; JULF01000310.1; JULF01000311.1; JULF01000312.1; JULF01000313.1; JULF01000314.1; JULF01000317.1; JULF01000318.1; JULF01000319.1; JULF01000030.1; JULF01000004.1; JULF01000032.1; JULF01000033.1; JULF01000034.1; JULF01000006.1; JULF01000036.1; JULF01000037.1; JULF01000038.1; JULF01000008.1; JULF01000039.1; JULF01000040.1; JULF01000009.1; JULF01000041.1; JULF01000010.1; JULF01000043.1; JULF01000044.1; JULF01000045.1; JULF01000047.1; JULF01000011.1; JULF01000048.1; JULF01000050.1; JULF01000054.1; JULF01000055.1; JULF01000056.1; JULF01000057.1; JULF01000001.1; JULF01000059.1; JULF01000060.1; JULF01000061.1; JULF01000063.1; JULF01000066.1; JULF01000014.1; JULF01000067.1; JULF01000069.1; JULF01000070.1; JULF01000072.1; JULF01000073.1; JULF01000074.1; JULF01000075.1; JULF01000076.1; JULF01000078.1; JULF01000016.1; JULF01000080.1; JULF01000017.1; JULF01000081.1; JULF01000084.1; JULF01000085.1; JULF01000086.1; JULF01000087.1; JULF01000091.1; JULF01000093.1; JULF01000018.1; JULF01000095.1; JULF01000096.1; JULF01000097.1; JULF01000099.1; JULF01000100.1; JULF01000101.1; JULF01000102.1; JULF01000103.1; JULF01000105.1; JULF01000106.1; JULF01000107.1; JULF01000108.1; JULF01000110.1; JULF01000111.1; JULF01000112.1; JULF01000114.1; JULF01000115.1; JULF01000116.1; JULF01000117.1; JULF01000118.1; JULF01000119.1; JULF01000120.1; JULF01000122.1; JULF01000124.1; JULF01000125.1; JULF01000127.1; JULF01000128.1; JULF01000129.1; JULF01000130.1; JULF01000133.1; JULF01000019.1; JULF01000136.1; JULF01000137.1; JULF01000138.1; JULF01000020.1; JULF01000140.1; JULF01000141.1; JULF01000143.1; JULF01000144.1; JULF01000145.1; JULF01000146.1; JULF01000148.1; JULF01000149.1; JULF01000152.1; JULF01000153.1; JULF01000154.1; JULF01000156.1; JULF01000157.1; JULF01000021.1; JULF01000159.1; JULF01000160.1; JULF01000163.1; JULF01000164.1; JULF01000166.1; JULF01000167.1; JULF01000168.1; JULF01000169.1; JULF01000170.1; JULF01000171.1; JULF01000172.1; JULF01000173.1; JULF01000174.1; JULF01000175.1; JULF01000179.1; JULF01000180.1; JULF01000181.1; JULF01000183.1; JULF01000184.1; JULF01000185.1; JULF01000186.1; JULF01000189.1; JULF01000190.1; JULF01000191.1; JULF01000192.1; JULF01000193.1; JULF01000194.1; JULF01000195.1; JULF01000197.1; JULF01000198.1; JULF01000200.1; JULF01000201.1; JULF01000202.1; JULF01000204.1; JULF01000205.1

Compact view

JULF01000090.1 - Region 1 - gallic_acid_met

Download region GenBank file

Location: 1 - 12,581 nt. (total: 12,581 nt) Show pHMM detection rules used

Region on contig edge.

gallic_acid_met: (minimum(1, [Flavoprotein, Semialdhyde_dh]) and gallic_acid)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JULF01000123.1 - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 20,034 - 35,998 nt. (total: 15,965 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

JULF01000187.1 - Region 1 - Pyruvate2acetate-formate

Download region GenBank file

Location: 7,243 - 30,493 nt. (total: 23,251 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters