GCA_001302645.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

CP012650.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	T3PKS	523,111	564,280
Region 1.2	RiPP-like	1,444,961	1,457,111	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	16%
Region 1.3	terpene	1,523,242	1,544,123
Region 1.4	cyclic-lactone-autoinducer	1,756,257	1,776,962

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	T3PKS	523,111	564,280
Region 1.2	RiPP-like	1,444,961	1,457,111	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	16%
Region 1.3	terpene	1,523,242	1,544,123
Region 1.4	cyclic-lactone-autoinducer	1,756,257	1,776,962

Compact view

CP012650.1 - Region 1 - T3PKS

Download region GenBank file

Download region SVG

Location: 523,111 - 564,280 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

CP012650.1 - Region 2 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1,444,961 - 1,457,111 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

CP012650.1 - Region 3 - terpene

Download region GenBank file

Download region SVG

Location: 1,523,242 - 1,544,123 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

CP012650.1 - Region 4 - cyclic-lactone-autoinducer

Download region GenBank file

Download region SVG

Location: 1,756,257 - 1,776,962 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.