GCA_001541405.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

LJGQ01000014.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	LAP	1	16,370	listeriolysin S	RiPP:LAP	25%

LJGQ01000033.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 115.1	RiPP-like	25,073	36,008

LJGQ01000006.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 143.1	RiPP-like	3,397	18,807	gassericin T	RiPP	44%

LJGQ01000094.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 178.1	RiPP-like	1,755	14,137

No secondary metabolite regions were found in these records:: LJGQ01000001.1; LJGQ01000100.1; LJGQ01000101.1; LJGQ01000102.1; LJGQ01000103.1; LJGQ01000105.1; LJGQ01000106.1; LJGQ01000107.1; LJGQ01000108.1; LJGQ01000109.1; LJGQ01000011.1; LJGQ01000110.1; LJGQ01000111.1; LJGQ01000112.1; LJGQ01000113.1; LJGQ01000114.1; LJGQ01000115.1; LJGQ01000116.1; LJGQ01000117.1; LJGQ01000118.1; LJGQ01000119.1; LJGQ01000012.1; LJGQ01000120.1; LJGQ01000121.1; LJGQ01000122.1; LJGQ01000123.1; LJGQ01000124.1; LJGQ01000125.1; LJGQ01000126.1; LJGQ01000127.1; LJGQ01000128.1; LJGQ01000129.1; LJGQ01000013.1; LJGQ01000130.1; LJGQ01000131.1; LJGQ01000132.1; LJGQ01000133.1; LJGQ01000134.1; LJGQ01000135.1; LJGQ01000136.1; LJGQ01000137.1; LJGQ01000138.1; LJGQ01000139.1; LJGQ01000140.1; LJGQ01000141.1; LJGQ01000142.1; LJGQ01000143.1; LJGQ01000144.1; LJGQ01000149.1; LJGQ01000015.1; LJGQ01000151.1; LJGQ01000152.1; LJGQ01000153.1; LJGQ01000155.1; LJGQ01000157.1; LJGQ01000158.1; LJGQ01000016.1; LJGQ01000160.1; LJGQ01000161.1; LJGQ01000163.1; LJGQ01000164.1; LJGQ01000165.1; LJGQ01000166.1; LJGQ01000167.1; LJGQ01000168.1; LJGQ01000169.1; LJGQ01000017.1; LJGQ01000170.1; LJGQ01000171.1; LJGQ01000172.1; LJGQ01000174.1; LJGQ01000177.1; LJGQ01000178.1; LJGQ01000179.1; LJGQ01000018.1; LJGQ01000180.1; LJGQ01000182.1; LJGQ01000183.1; LJGQ01000184.1; LJGQ01000187.1; LJGQ01000188.1; LJGQ01000189.1; LJGQ01000019.1; LJGQ01000190.1; LJGQ01000191.1; LJGQ01000193.1; LJGQ01000194.1; LJGQ01000195.1; LJGQ01000196.1; LJGQ01000197.1; LJGQ01000199.1; LJGQ01000002.1; LJGQ01000020.1; LJGQ01000200.1; LJGQ01000202.1; LJGQ01000204.1; LJGQ01000207.1; LJGQ01000209.1; LJGQ01000021.1; LJGQ01000212.1; LJGQ01000218.1; LJGQ01000022.1; LJGQ01000023.1; LJGQ01000024.1; LJGQ01000025.1; LJGQ01000026.1; LJGQ01000027.1; LJGQ01000028.1; LJGQ01000029.1; LJGQ01000003.1; LJGQ01000030.1; LJGQ01000031.1; LJGQ01000032.1; LJGQ01000034.1; LJGQ01000035.1; LJGQ01000036.1; LJGQ01000037.1; LJGQ01000038.1; LJGQ01000039.1; LJGQ01000004.1; LJGQ01000040.1; LJGQ01000041.1; LJGQ01000042.1; LJGQ01000043.1; LJGQ01000044.1; LJGQ01000046.1; LJGQ01000047.1; LJGQ01000048.1; LJGQ01000049.1; LJGQ01000005.1; LJGQ01000050.1; LJGQ01000051.1; LJGQ01000052.1; LJGQ01000053.1; LJGQ01000054.1; LJGQ01000055.1; LJGQ01000056.1; LJGQ01000057.1; LJGQ01000058.1; LJGQ01000059.1; LJGQ01000060.1; LJGQ01000061.1; LJGQ01000062.1; LJGQ01000063.1; LJGQ01000064.1; LJGQ01000065.1; LJGQ01000066.1; LJGQ01000067.1; LJGQ01000068.1; LJGQ01000069.1; LJGQ01000070.1; LJGQ01000071.1; LJGQ01000072.1; LJGQ01000073.1; LJGQ01000074.1; LJGQ01000075.1; LJGQ01000076.1; LJGQ01000077.1; LJGQ01000078.1; LJGQ01000079.1; LJGQ01000080.1; LJGQ01000081.1; LJGQ01000082.1; LJGQ01000083.1; LJGQ01000084.1; LJGQ01000085.1; LJGQ01000087.1; LJGQ01000088.1; LJGQ01000089.1; LJGQ01000009.1; LJGQ01000090.1; LJGQ01000091.1; LJGQ01000092.1; LJGQ01000093.1; LJGQ01000095.1; LJGQ01000097.1; LJGQ01000099.1

Compact view

LJGQ01000014.1 - Region 1 - LAP

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Location: 1 - 16,370 nt. (total: 16,370 nt) Show pHMM detection rules used

Region on contig edge.

LAP: ((((goadsporin_like or PF00881 or TIGR03605) and (YcaO or TIGR03882 or TIGR03604)) or TIGR03603 or TIGR03602) and not cyanobactin_synth)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

LJGQ01000033.1 - Region 1 - RiPP-like

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Location: 25,073 - 36,008 nt. (total: 10,936 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

LJGQ01000006.1 - Region 1 - RiPP-like

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Location: 3,397 - 18,807 nt. (total: 15,411 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

LJGQ01000094.1 - Region 1 - RiPP-like

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Location: 1,755 - 14,137 nt. (total: 12,383 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.