GCA_001541505.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

LJOL01000141.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	RiPP-like	1	10,802

LJOL01000057.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 145.1	RiPP-like	22,610	33,545

LJOL01000063.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 151.1	RiPP-like	8,305	23,503	gassericin T	RiPP	44%

Region	Type	From	To	Most similar known cluster	Similarity
Region 44.1	RiPP-like	1	10,802
Region 145.1	RiPP-like	22,610	33,545
Region 151.1	RiPP-like	8,305	23,503	gassericin T	RiPP	44%

No secondary metabolite regions were found in these records:: LJOL01000001.1; LJOL01000010.1; LJOL01000100.1; LJOL01000101.1; LJOL01000102.1; LJOL01000103.1; LJOL01000105.1; LJOL01000106.1; LJOL01000107.1; LJOL01000108.1; LJOL01000109.1; LJOL01000011.1; LJOL01000110.1; LJOL01000111.1; LJOL01000112.1; LJOL01000113.1; LJOL01000114.1; LJOL01000115.1; LJOL01000116.1; LJOL01000117.1; LJOL01000119.1; LJOL01000012.1; LJOL01000120.1; LJOL01000121.1; LJOL01000122.1; LJOL01000123.1; LJOL01000124.1; LJOL01000125.1; LJOL01000126.1; LJOL01000127.1; LJOL01000128.1; LJOL01000129.1; LJOL01000013.1; LJOL01000130.1; LJOL01000131.1; LJOL01000132.1; LJOL01000133.1; LJOL01000135.1; LJOL01000136.1; LJOL01000137.1; LJOL01000139.1; LJOL01000014.1; LJOL01000140.1; LJOL01000142.1; LJOL01000143.1; LJOL01000144.1; LJOL01000145.1; LJOL01000149.1; LJOL01000015.1; LJOL01000150.1; LJOL01000151.1; LJOL01000152.1; LJOL01000153.1; LJOL01000154.1; LJOL01000155.1; LJOL01000156.1; LJOL01000158.1; LJOL01000159.1; LJOL01000016.1; LJOL01000160.1; LJOL01000161.1; LJOL01000162.1; LJOL01000163.1; LJOL01000164.1; LJOL01000165.1; LJOL01000167.1; LJOL01000169.1; LJOL01000017.1; LJOL01000170.1; LJOL01000172.1; LJOL01000173.1; LJOL01000176.1; LJOL01000177.1; LJOL01000178.1; LJOL01000179.1; LJOL01000018.1; LJOL01000180.1; LJOL01000181.1; LJOL01000183.1; LJOL01000186.1; LJOL01000187.1; LJOL01000188.1; LJOL01000189.1; LJOL01000019.1; LJOL01000190.1; LJOL01000191.1; LJOL01000192.1; LJOL01000194.1; LJOL01000196.1; LJOL01000197.1; LJOL01000198.1; LJOL01000199.1; LJOL01000002.1; LJOL01000020.1; LJOL01000200.1; LJOL01000202.1; LJOL01000206.1; LJOL01000209.1; LJOL01000210.1; LJOL01000211.1; LJOL01000214.1; LJOL01000215.1; LJOL01000218.1; LJOL01000219.1; LJOL01000022.1; LJOL01000225.1; LJOL01000023.1; LJOL01000230.1; LJOL01000232.1; LJOL01000233.1; LJOL01000024.1; LJOL01000025.1; LJOL01000026.1; LJOL01000027.1; LJOL01000028.1; LJOL01000029.1; LJOL01000030.1; LJOL01000031.1; LJOL01000032.1; LJOL01000033.1; LJOL01000034.1; LJOL01000035.1; LJOL01000036.1; LJOL01000037.1; LJOL01000038.1; LJOL01000039.1; LJOL01000004.1; LJOL01000040.1; LJOL01000041.1; LJOL01000043.1; LJOL01000044.1; LJOL01000045.1; LJOL01000046.1; LJOL01000047.1; LJOL01000048.1; LJOL01000049.1; LJOL01000005.1; LJOL01000050.1; LJOL01000052.1; LJOL01000053.1; LJOL01000054.1; LJOL01000055.1; LJOL01000056.1; LJOL01000058.1; LJOL01000059.1; LJOL01000006.1; LJOL01000060.1; LJOL01000062.1; LJOL01000064.1; LJOL01000065.1; LJOL01000066.1; LJOL01000067.1; LJOL01000069.1; LJOL01000007.1; LJOL01000070.1; LJOL01000071.1; LJOL01000072.1; LJOL01000073.1; LJOL01000074.1; LJOL01000075.1; LJOL01000076.1; LJOL01000077.1; LJOL01000078.1; LJOL01000079.1; LJOL01000008.1; LJOL01000080.1; LJOL01000081.1; LJOL01000085.1; LJOL01000086.1; LJOL01000087.1; LJOL01000088.1; LJOL01000089.1; LJOL01000009.1; LJOL01000090.1; LJOL01000091.1; LJOL01000092.1; LJOL01000094.1; LJOL01000095.1; LJOL01000096.1; LJOL01000098.1; LJOL01000099.1

Compact view

LJOL01000141.1 - Region 1 - RiPP-like

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Location: 1 - 10,802 nt. (total: 10,802 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

LJOL01000057.1 - Region 1 - RiPP-like

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Location: 22,610 - 33,545 nt. (total: 10,936 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

LJOL01000063.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 8,305 - 23,503 nt. (total: 15,199 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters