GCA_001541515.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

LJOK01000101.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 4.1	RiPP-like	1	5,557

LJOK01000031.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 117.1	RiPP-like	47,899	58,834

LJOK01000069.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 154.1	RiPP-like	18,825	25,507	gassericin T	RiPP	33%

LJOK01000076.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 162.1	RiPP-like	1	8,994	gassericin T	RiPP	22%

Region	Type	From	To	Most similar known cluster	Similarity
Region 4.1	RiPP-like	1	5,557
Region 117.1	RiPP-like	47,899	58,834
Region 154.1	RiPP-like	18,825	25,507	gassericin T	RiPP	33%
Region 162.1	RiPP-like	1	8,994	gassericin T	RiPP	22%

No secondary metabolite regions were found in these records:: LJOK01000001.1; LJOK01000010.1; LJOK01000100.1; LJOK01000102.1; LJOK01000103.1; LJOK01000104.1; LJOK01000105.1; LJOK01000106.1; LJOK01000107.1; LJOK01000108.1; LJOK01000011.1; LJOK01000110.1; LJOK01000111.1; LJOK01000112.1; LJOK01000113.1; LJOK01000114.1; LJOK01000115.1; LJOK01000116.1; LJOK01000117.1; LJOK01000118.1; LJOK01000119.1; LJOK01000012.1; LJOK01000120.1; LJOK01000121.1; LJOK01000122.1; LJOK01000123.1; LJOK01000124.1; LJOK01000125.1; LJOK01000127.1; LJOK01000128.1; LJOK01000129.1; LJOK01000013.1; LJOK01000130.1; LJOK01000131.1; LJOK01000132.1; LJOK01000133.1; LJOK01000134.1; LJOK01000136.1; LJOK01000137.1; LJOK01000138.1; LJOK01000139.1; LJOK01000014.1; LJOK01000140.1; LJOK01000141.1; LJOK01000142.1; LJOK01000144.1; LJOK01000145.1; LJOK01000146.1; LJOK01000147.1; LJOK01000148.1; LJOK01000149.1; LJOK01000015.1; LJOK01000150.1; LJOK01000151.1; LJOK01000152.1; LJOK01000153.1; LJOK01000154.1; LJOK01000155.1; LJOK01000157.1; LJOK01000159.1; LJOK01000016.1; LJOK01000161.1; LJOK01000162.1; LJOK01000163.1; LJOK01000164.1; LJOK01000165.1; LJOK01000166.1; LJOK01000167.1; LJOK01000169.1; LJOK01000017.1; LJOK01000170.1; LJOK01000171.1; LJOK01000173.1; LJOK01000176.1; LJOK01000177.1; LJOK01000178.1; LJOK01000179.1; LJOK01000018.1; LJOK01000180.1; LJOK01000183.1; LJOK01000184.1; LJOK01000185.1; LJOK01000186.1; LJOK01000187.1; LJOK01000189.1; LJOK01000019.1; LJOK01000190.1; LJOK01000191.1; LJOK01000192.1; LJOK01000194.1; LJOK01000195.1; LJOK01000197.1; LJOK01000198.1; LJOK01000002.1; LJOK01000020.1; LJOK01000200.1; LJOK01000203.1; LJOK01000204.1; LJOK01000205.1; LJOK01000207.1; LJOK01000208.1; LJOK01000021.1; LJOK01000212.1; LJOK01000215.1; LJOK01000022.1; LJOK01000220.1; LJOK01000221.1; LJOK01000222.1; LJOK01000023.1; LJOK01000024.1; LJOK01000025.1; LJOK01000027.1; LJOK01000028.1; LJOK01000029.1; LJOK01000003.1; LJOK01000032.1; LJOK01000033.1; LJOK01000034.1; LJOK01000036.1; LJOK01000037.1; LJOK01000039.1; LJOK01000004.1; LJOK01000040.1; LJOK01000041.1; LJOK01000042.1; LJOK01000043.1; LJOK01000044.1; LJOK01000045.1; LJOK01000046.1; LJOK01000047.1; LJOK01000048.1; LJOK01000049.1; LJOK01000005.1; LJOK01000050.1; LJOK01000051.1; LJOK01000052.1; LJOK01000053.1; LJOK01000056.1; LJOK01000057.1; LJOK01000058.1; LJOK01000059.1; LJOK01000006.1; LJOK01000060.1; LJOK01000061.1; LJOK01000062.1; LJOK01000063.1; LJOK01000064.1; LJOK01000065.1; LJOK01000066.1; LJOK01000067.1; LJOK01000068.1; LJOK01000007.1; LJOK01000070.1; LJOK01000071.1; LJOK01000072.1; LJOK01000073.1; LJOK01000074.1; LJOK01000075.1; LJOK01000078.1; LJOK01000008.1; LJOK01000080.1; LJOK01000081.1; LJOK01000082.1; LJOK01000083.1; LJOK01000084.1; LJOK01000085.1; LJOK01000086.1; LJOK01000087.1; LJOK01000088.1; LJOK01000089.1; LJOK01000009.1; LJOK01000090.1; LJOK01000091.1; LJOK01000092.1; LJOK01000093.1; LJOK01000094.1; LJOK01000095.1; LJOK01000096.1; LJOK01000097.1; LJOK01000098.1; LJOK01000099.1

Compact view

LJOK01000101.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 5,557 nt. (total: 5,557 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

LJOK01000031.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 47,899 - 58,834 nt. (total: 10,936 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

LJOK01000069.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 18,825 - 25,507 nt. (total: 6,683 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

LJOK01000076.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 8,994 nt. (total: 8,994 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters