GCA_001546015.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

LJCZ01000013.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	RiPP-like	1	6,462	gassericin T	RiPP	33%

LJCZ01000237.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 119.1	RiPP-like	1	3,223

LJCZ01000072.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 180.1	RiPP-like	1	8,989	gassericin T	RiPP	22%

No secondary metabolite regions were found in these records:: LJCZ01000001.1; LJCZ01000010.1; LJCZ01000100.1; LJCZ01000101.1; LJCZ01000103.1; LJCZ01000104.1; LJCZ01000105.1; LJCZ01000106.1; LJCZ01000107.1; LJCZ01000108.1; LJCZ01000109.1; LJCZ01000011.1; LJCZ01000110.1; LJCZ01000111.1; LJCZ01000113.1; LJCZ01000114.1; LJCZ01000115.1; LJCZ01000117.1; LJCZ01000118.1; LJCZ01000119.1; LJCZ01000012.1; LJCZ01000121.1; LJCZ01000123.1; LJCZ01000124.1; LJCZ01000125.1; LJCZ01000126.1; LJCZ01000127.1; LJCZ01000128.1; LJCZ01000129.1; LJCZ01000130.1; LJCZ01000131.1; LJCZ01000132.1; LJCZ01000133.1; LJCZ01000134.1; LJCZ01000135.1; LJCZ01000136.1; LJCZ01000137.1; LJCZ01000138.1; LJCZ01000139.1; LJCZ01000014.1; LJCZ01000140.1; LJCZ01000141.1; LJCZ01000142.1; LJCZ01000143.1; LJCZ01000144.1; LJCZ01000146.1; LJCZ01000148.1; LJCZ01000149.1; LJCZ01000015.1; LJCZ01000150.1; LJCZ01000151.1; LJCZ01000152.1; LJCZ01000154.1; LJCZ01000155.1; LJCZ01000157.1; LJCZ01000158.1; LJCZ01000159.1; LJCZ01000016.1; LJCZ01000160.1; LJCZ01000161.1; LJCZ01000162.1; LJCZ01000163.1; LJCZ01000165.1; LJCZ01000166.1; LJCZ01000168.1; LJCZ01000169.1; LJCZ01000170.1; LJCZ01000171.1; LJCZ01000172.1; LJCZ01000173.1; LJCZ01000174.1; LJCZ01000176.1; LJCZ01000177.1; LJCZ01000178.1; LJCZ01000179.1; LJCZ01000018.1; LJCZ01000180.1; LJCZ01000182.1; LJCZ01000183.1; LJCZ01000186.1; LJCZ01000188.1; LJCZ01000019.1; LJCZ01000192.1; LJCZ01000193.1; LJCZ01000194.1; LJCZ01000195.1; LJCZ01000196.1; LJCZ01000197.1; LJCZ01000198.1; LJCZ01000199.1; LJCZ01000002.1; LJCZ01000020.1; LJCZ01000200.1; LJCZ01000201.1; LJCZ01000202.1; LJCZ01000203.1; LJCZ01000204.1; LJCZ01000205.1; LJCZ01000207.1; LJCZ01000209.1; LJCZ01000021.1; LJCZ01000210.1; LJCZ01000213.1; LJCZ01000214.1; LJCZ01000215.1; LJCZ01000217.1; LJCZ01000022.1; LJCZ01000220.1; LJCZ01000223.1; LJCZ01000224.1; LJCZ01000225.1; LJCZ01000226.1; LJCZ01000228.1; LJCZ01000229.1; LJCZ01000023.1; LJCZ01000230.1; LJCZ01000235.1; LJCZ01000238.1; LJCZ01000024.1; LJCZ01000240.1; LJCZ01000242.1; LJCZ01000243.1; LJCZ01000244.1; LJCZ01000025.1; LJCZ01000252.1; LJCZ01000253.1; LJCZ01000254.1; LJCZ01000259.1; LJCZ01000026.1; LJCZ01000027.1; LJCZ01000028.1; LJCZ01000029.1; LJCZ01000003.1; LJCZ01000030.1; LJCZ01000031.1; LJCZ01000032.1; LJCZ01000033.1; LJCZ01000034.1; LJCZ01000035.1; LJCZ01000036.1; LJCZ01000037.1; LJCZ01000038.1; LJCZ01000039.1; LJCZ01000004.1; LJCZ01000041.1; LJCZ01000042.1; LJCZ01000043.1; LJCZ01000044.1; LJCZ01000045.1; LJCZ01000046.1; LJCZ01000047.1; LJCZ01000048.1; LJCZ01000049.1; LJCZ01000005.1; LJCZ01000050.1; LJCZ01000051.1; LJCZ01000052.1; LJCZ01000053.1; LJCZ01000054.1; LJCZ01000055.1; LJCZ01000056.1; LJCZ01000057.1; LJCZ01000058.1; LJCZ01000059.1; LJCZ01000006.1; LJCZ01000060.1; LJCZ01000061.1; LJCZ01000062.1; LJCZ01000063.1; LJCZ01000064.1; LJCZ01000065.1; LJCZ01000067.1; LJCZ01000068.1; LJCZ01000069.1; LJCZ01000007.1; LJCZ01000070.1; LJCZ01000071.1; LJCZ01000073.1; LJCZ01000074.1; LJCZ01000075.1; LJCZ01000076.1; LJCZ01000077.1; LJCZ01000078.1; LJCZ01000079.1; LJCZ01000008.1; LJCZ01000080.1; LJCZ01000081.1; LJCZ01000082.1; LJCZ01000083.1; LJCZ01000084.1; LJCZ01000085.1; LJCZ01000086.1; LJCZ01000087.1; LJCZ01000088.1; LJCZ01000089.1; LJCZ01000009.1; LJCZ01000090.1; LJCZ01000091.1; LJCZ01000092.1; LJCZ01000093.1; LJCZ01000094.1; LJCZ01000095.1; LJCZ01000096.1; LJCZ01000097.1; LJCZ01000098.1; LJCZ01000099.1

Compact view

LJCZ01000013.1 - Region 1 - RiPP-like

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Location: 1 - 6,462 nt. (total: 6,462 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

LJCZ01000237.1 - Region 1 - RiPP-like

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Location: 1 - 3,223 nt. (total: 3,223 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

LJCZ01000072.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 8,989 nt. (total: 8,989 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters