GCA_001546025.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

LJDA01000206.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 105.1	RiPP-like	1	3,605	gassericin T	RiPP	33%

LJDA01000066.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 167.1	RiPP-like	11,776	21,970

LJDA01000009.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 193.1	RiPP-like	22,517	33,452

No secondary metabolite regions were found in these records:: LJDA01000001.1; LJDA01000100.1; LJDA01000101.1; LJDA01000102.1; LJDA01000103.1; LJDA01000104.1; LJDA01000105.1; LJDA01000106.1; LJDA01000107.1; LJDA01000108.1; LJDA01000109.1; LJDA01000011.1; LJDA01000110.1; LJDA01000111.1; LJDA01000112.1; LJDA01000113.1; LJDA01000114.1; LJDA01000115.1; LJDA01000116.1; LJDA01000117.1; LJDA01000118.1; LJDA01000119.1; LJDA01000012.1; LJDA01000120.1; LJDA01000121.1; LJDA01000123.1; LJDA01000124.1; LJDA01000125.1; LJDA01000126.1; LJDA01000127.1; LJDA01000128.1; LJDA01000129.1; LJDA01000013.1; LJDA01000130.1; LJDA01000131.1; LJDA01000132.1; LJDA01000133.1; LJDA01000134.1; LJDA01000135.1; LJDA01000136.1; LJDA01000137.1; LJDA01000138.1; LJDA01000139.1; LJDA01000140.1; LJDA01000142.1; LJDA01000143.1; LJDA01000144.1; LJDA01000145.1; LJDA01000146.1; LJDA01000147.1; LJDA01000148.1; LJDA01000149.1; LJDA01000015.1; LJDA01000150.1; LJDA01000152.1; LJDA01000153.1; LJDA01000154.1; LJDA01000155.1; LJDA01000156.1; LJDA01000157.1; LJDA01000158.1; LJDA01000159.1; LJDA01000016.1; LJDA01000160.1; LJDA01000161.1; LJDA01000163.1; LJDA01000165.1; LJDA01000167.1; LJDA01000168.1; LJDA01000169.1; LJDA01000017.1; LJDA01000170.1; LJDA01000171.1; LJDA01000173.1; LJDA01000174.1; LJDA01000175.1; LJDA01000177.1; LJDA01000178.1; LJDA01000179.1; LJDA01000018.1; LJDA01000180.1; LJDA01000181.1; LJDA01000182.1; LJDA01000183.1; LJDA01000184.1; LJDA01000185.1; LJDA01000186.1; LJDA01000187.1; LJDA01000188.1; LJDA01000019.1; LJDA01000190.1; LJDA01000191.1; LJDA01000193.1; LJDA01000194.1; LJDA01000196.1; LJDA01000197.1; LJDA01000198.1; LJDA01000199.1; LJDA01000002.1; LJDA01000020.1; LJDA01000200.1; LJDA01000201.1; LJDA01000202.1; LJDA01000204.1; LJDA01000207.1; LJDA01000208.1; LJDA01000021.1; LJDA01000214.1; LJDA01000218.1; LJDA01000219.1; LJDA01000022.1; LJDA01000220.1; LJDA01000223.1; LJDA01000224.1; LJDA01000227.1; LJDA01000228.1; LJDA01000231.1; LJDA01000234.1; LJDA01000235.1; LJDA01000236.1; LJDA01000240.1; LJDA01000243.1; LJDA01000247.1; LJDA01000249.1; LJDA01000253.1; LJDA01000026.1; LJDA01000027.1; LJDA01000028.1; LJDA01000029.1; LJDA01000003.1; LJDA01000030.1; LJDA01000031.1; LJDA01000032.1; LJDA01000033.1; LJDA01000034.1; LJDA01000035.1; LJDA01000036.1; LJDA01000037.1; LJDA01000038.1; LJDA01000039.1; LJDA01000004.1; LJDA01000040.1; LJDA01000041.1; LJDA01000043.1; LJDA01000044.1; LJDA01000045.1; LJDA01000046.1; LJDA01000048.1; LJDA01000049.1; LJDA01000005.1; LJDA01000050.1; LJDA01000051.1; LJDA01000052.1; LJDA01000053.1; LJDA01000054.1; LJDA01000055.1; LJDA01000056.1; LJDA01000057.1; LJDA01000058.1; LJDA01000059.1; LJDA01000006.1; LJDA01000060.1; LJDA01000061.1; LJDA01000062.1; LJDA01000063.1; LJDA01000067.1; LJDA01000068.1; LJDA01000069.1; LJDA01000007.1; LJDA01000070.1; LJDA01000071.1; LJDA01000072.1; LJDA01000073.1; LJDA01000074.1; LJDA01000075.1; LJDA01000076.1; LJDA01000077.1; LJDA01000078.1; LJDA01000079.1; LJDA01000008.1; LJDA01000080.1; LJDA01000081.1; LJDA01000082.1; LJDA01000083.1; LJDA01000084.1; LJDA01000085.1; LJDA01000086.1; LJDA01000087.1; LJDA01000088.1; LJDA01000089.1; LJDA01000090.1; LJDA01000091.1; LJDA01000092.1; LJDA01000093.1; LJDA01000094.1; LJDA01000095.1; LJDA01000096.1; LJDA01000097.1; LJDA01000098.1; LJDA01000099.1

Compact view

LJDA01000206.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 3,605 nt. (total: 3,605 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

LJDA01000066.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 11,776 - 21,970 nt. (total: 10,195 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

LJDA01000009.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 22,517 - 33,452 nt. (total: 10,936 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.