GCA_001595615.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

LOMH01000021.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RiPP-like	26,357	38,507

LOMH01000034.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 36.1	cyclic-lactone-autoinducer	10,774	31,479

LOMH01000045.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	T3PKS	1	26,479

LOMH01000081.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 81.1	terpene	527	12,724

Region	Type	From	To	Similarity
Region 23.1	RiPP-like	26,357	38,507
Region 36.1	cyclic-lactone-autoinducer	10,774	31,479
Region 46.1	T3PKS	1	26,479
Region 81.1	terpene	527	12,724

No secondary metabolite regions were found in these records:: LOMH01000074.1; LOMH01000036.1; LOMH01000001.1; LOMH01000002.1; LOMH01000003.1; LOMH01000004.1; LOMH01000005.1; LOMH01000006.1; LOMH01000007.1; LOMH01000008.1; LOMH01000009.1; LOMH01000010.1; LOMH01000011.1; LOMH01000012.1; LOMH01000013.1; LOMH01000014.1; LOMH01000015.1; LOMH01000016.1; LOMH01000017.1; LOMH01000018.1; LOMH01000019.1; LOMH01000020.1; LOMH01000022.1; LOMH01000023.1; LOMH01000024.1; LOMH01000025.1; LOMH01000026.1; LOMH01000027.1; LOMH01000028.1; LOMH01000029.1; LOMH01000030.1; LOMH01000031.1; LOMH01000032.1; LOMH01000033.1; LOMH01000035.1; LOMH01000037.1; LOMH01000038.1; LOMH01000039.1; LOMH01000040.1; LOMH01000041.1; LOMH01000042.1; LOMH01000043.1; LOMH01000044.1; LOMH01000046.1; LOMH01000047.1; LOMH01000048.1; LOMH01000049.1; LOMH01000050.1; LOMH01000051.1; LOMH01000052.1; LOMH01000053.1; LOMH01000054.1; LOMH01000055.1; LOMH01000056.1; LOMH01000057.1; LOMH01000058.1; LOMH01000059.1; LOMH01000060.1; LOMH01000061.1; LOMH01000062.1; LOMH01000063.1; LOMH01000064.1; LOMH01000065.1; LOMH01000066.1; LOMH01000067.1; LOMH01000068.1; LOMH01000069.1; LOMH01000070.1; LOMH01000071.1; LOMH01000072.1; LOMH01000073.1; LOMH01000075.1; LOMH01000076.1; LOMH01000077.1; LOMH01000078.1; LOMH01000079.1; LOMH01000080.1; LOMH01000082.1; LOMH01000083.1; LOMH01000084.1; LOMH01000085.1; LOMH01000086.1; LOMH01000087.1; LOMH01000088.1; LOMH01000089.1; LOMH01000090.1; LOMH01000091.1; LOMH01000092.1; LOMH01000093.1; LOMH01000094.1; LOMH01000095.1; LOMH01000096.1; LOMH01000097.1; LOMH01000098.1; LOMH01000099.1; LOMH01000100.1; LOMH01000101.1; LOMH01000102.1; LOMH01000103.1; LOMH01000104.1; LOMH01000105.1; LOMH01000106.1; LOMH01000107.1; LOMH01000108.1; LOMH01000109.1; LOMH01000110.1; LOMH01000111.1; LOMH01000112.1; LOMH01000113.1; LOMH01000114.1; LOMH01000115.1; LOMH01000116.1; LOMH01000117.1

Compact view

LOMH01000021.1 - Region 1 - RiPP-like

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Location: 26,357 - 38,507 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

LOMH01000034.1 - Region 1 - cyclic-lactone-autoinducer

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Location: 10,774 - 31,479 nt. (total: 20,706 nt) Show pHMM detection rules used

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

LOMH01000045.1 - Region 1 - T3PKS

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Location: 1 - 26,479 nt. (total: 26,479 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

LOMH01000081.1 - Region 1 - terpene

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Location: 527 - 12,724 nt. (total: 12,198 nt) Show pHMM detection rules used

Region on contig edge.

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.