GCA_001636215.1 - 2 region(s)

Identified primary metabolite regions

LTDP01000007.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 3.1	TPP_fatty_acids	Putative	93,895	119,596

LTDP01000016.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 25.1	Pyruvate2acetate-formate	SCFA	12,474	30,528	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 3.1	TPP_fatty_acids	Putative	93,895	119,596
Region 25.1	Pyruvate2acetate-formate	SCFA	12,474	30,528	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

No primary metabolite regions were found in these records:: LTDP01000014.1; LTDP01000107.1; LTDP01000154.1; LTDP01000155.1; LTDP01000057.1; LTDP01000156.1; LTDP01000157.1; LTDP01000158.1; LTDP01000058.1; LTDP01000059.1; LTDP01000159.1; LTDP01000060.1; LTDP01000015.1; LTDP01000061.1; LTDP01000160.1; LTDP01000062.1; LTDP01000063.1; LTDP01000161.1; LTDP01000162.1; LTDP01000064.1; LTDP01000163.1; LTDP01000065.1; LTDP01000164.1; LTDP01000066.1; LTDP01000001.1; LTDP01000067.1; LTDP01000165.1; LTDP01000068.1; LTDP01000166.1; LTDP01000167.1; LTDP01000168.1; LTDP01000069.1; LTDP01000112.1; LTDP01000070.1; LTDP01000169.1; LTDP01000170.1; LTDP01000071.1; LTDP01000171.1; LTDP01000172.1; LTDP01000173.1; LTDP01000072.1; LTDP01000073.1; LTDP01000174.1; LTDP01000017.1; LTDP01000175.1; LTDP01000176.1; LTDP01000074.1; LTDP01000177.1; LTDP01000075.1; LTDP01000178.1; LTDP01000076.1; LTDP01000179.1; LTDP01000077.1; LTDP01000180.1; LTDP01000113.1; LTDP01000181.1; LTDP01000006.1; LTDP01000078.1; LTDP01000079.1; LTDP01000182.1; LTDP01000080.1; LTDP01000183.1; LTDP01000081.1; LTDP01000082.1; LTDP01000184.1; LTDP01000018.1; LTDP01000083.1; LTDP01000084.1; LTDP01000085.1; LTDP01000185.1; LTDP01000009.1; LTDP01000186.1; LTDP01000086.1; LTDP01000087.1; LTDP01000088.1; LTDP01000089.1; LTDP01000019.1; LTDP01000090.1; LTDP01000091.1; LTDP01000092.1; LTDP01000093.1; LTDP01000187.1; LTDP01000094.1; LTDP01000095.1; LTDP01000188.1; LTDP01000096.1; LTDP01000097.1; LTDP01000020.1; LTDP01000098.1; LTDP01000099.1; LTDP01000189.1; LTDP01000101.1; LTDP01000102.1; LTDP01000021.1; LTDP01000108.1; LTDP01000114.1; LTDP01000115.1; LTDP01000022.1; LTDP01000116.1; LTDP01000023.1; LTDP01000024.1; LTDP01000117.1; LTDP01000025.1; LTDP01000026.1; LTDP01000118.1; LTDP01000012.1; LTDP01000027.1; LTDP01000119.1; LTDP01000028.1; LTDP01000120.1; LTDP01000029.1; LTDP01000121.1; LTDP01000030.1; LTDP01000122.1; LTDP01000031.1; LTDP01000032.1; LTDP01000013.1; LTDP01000033.1; LTDP01000123.1; LTDP01000124.1; LTDP01000034.1; LTDP01000035.1; LTDP01000125.1; LTDP01000126.1; LTDP01000036.1; LTDP01000127.1; LTDP01000037.1; LTDP01000128.1; LTDP01000038.1; LTDP01000129.1; LTDP01000039.1; LTDP01000130.1; LTDP01000040.1; LTDP01000131.1; LTDP01000132.1; LTDP01000041.1; LTDP01000133.1; LTDP01000109.1; LTDP01000010.1; LTDP01000134.1; LTDP01000135.1; LTDP01000042.1; LTDP01000136.1; LTDP01000004.1; LTDP01000137.1; LTDP01000043.1; LTDP01000138.1; LTDP01000008.1; LTDP01000110.1; LTDP01000044.1; LTDP01000045.1; LTDP01000139.1; LTDP01000046.1; LTDP01000047.1; LTDP01000002.1; LTDP01000048.1; LTDP01000140.1; LTDP01000049.1; LTDP01000141.1; LTDP01000111.1; LTDP01000142.1; LTDP01000143.1; LTDP01000144.1; LTDP01000050.1; LTDP01000051.1; LTDP01000145.1; LTDP01000146.1; LTDP01000147.1; LTDP01000052.1; LTDP01000053.1; LTDP01000011.1; LTDP01000005.1; LTDP01000148.1; LTDP01000149.1; LTDP01000150.1; LTDP01000151.1; LTDP01000152.1; LTDP01000054.1; LTDP01000055.1; LTDP01000056.1; LTDP01000153.1

Compact view

LTDP01000007.1 - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 93,895 - 119,596 nt. (total: 25,702 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

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Gene details

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KnownClusterBlast

Similar known gene clusters

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LTDP01000016.1 - Region 1 - Pyruvate2acetate-formate