GCA_001656635.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JTIG01000008.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	T3PKS	58,222	99,394

JTIG01000029.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	RiPP-like	26,221	36,406

JTIG01000040.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	RiPP-like	1	5,973

Region	Type	From	To	Similarity
Region 8.1	T3PKS	58,222	99,394
Region 29.1	RiPP-like	26,221	36,406
Region 40.1	RiPP-like	1	5,973

No secondary metabolite regions were found in these records:: JTIG01000001.1; JTIG01000002.1; JTIG01000003.1; JTIG01000004.1; JTIG01000005.1; JTIG01000006.1; JTIG01000007.1; JTIG01000009.1; JTIG01000010.1; JTIG01000011.1; JTIG01000012.1; JTIG01000013.1; JTIG01000014.1; JTIG01000015.1; JTIG01000016.1; JTIG01000017.1; JTIG01000018.1; JTIG01000019.1; JTIG01000020.1; JTIG01000021.1; JTIG01000022.1; JTIG01000023.1; JTIG01000024.1; JTIG01000025.1; JTIG01000026.1; JTIG01000027.1; JTIG01000028.1; JTIG01000030.1; JTIG01000031.1; JTIG01000032.1; JTIG01000033.1; JTIG01000034.1; JTIG01000035.1; JTIG01000036.1; JTIG01000037.1; JTIG01000038.1; JTIG01000039.1; JTIG01000041.1; JTIG01000042.1; JTIG01000043.1; JTIG01000044.1; JTIG01000045.1; JTIG01000046.1; JTIG01000047.1; JTIG01000048.1; JTIG01000049.1

Compact view

JTIG01000008.1 - Region 1 - T3PKS

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Location: 58,222 - 99,394 nt. (total: 41,173 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

JTIG01000029.1 - Region 1 - RiPP-like

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Location: 26,221 - 36,406 nt. (total: 10,186 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

JTIG01000040.1 - Region 1 - RiPP-like

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Location: 1 - 5,973 nt. (total: 5,973 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.