GCA_001656675.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JTIJ01000012.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	T3PKS	58,232	84,095

JTIJ01000014.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RiPP-like	70,289	80,048

JTIJ01000039.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 39.1	RiPP-like	1	5,739

Region	Type	From	To	Similarity
Region 12.1	T3PKS	58,232	84,095
Region 14.1	RiPP-like	70,289	80,048
Region 39.1	RiPP-like	1	5,739

Compact view

JTIJ01000012.1 - Region 1 - T3PKS

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Location: 58,232 - 84,095 nt. (total: 25,864 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

JTIJ01000014.1 - Region 1 - RiPP-like

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Location: 70,289 - 80,048 nt. (total: 9,760 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

JTIJ01000039.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 1 - 5,739 nt. (total: 5,739 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.