GCA_001656715.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

JTIP01000006.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	T3PKS	1	38,397

JTIP01000051.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 51.1	RiPP-like	6,328	16,513

JTIP01000094.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 94.1	RiPP-like	1	5,090

Region	Type	From	To	Similarity
Region 6.1	T3PKS	1	38,397
Region 51.1	RiPP-like	6,328	16,513
Region 94.1	RiPP-like	1	5,090

Compact view

JTIP01000006.1 - Region 1 - T3PKS

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Location: 1 - 38,397 nt. (total: 38,397 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

JTIP01000051.1 - Region 1 - RiPP-like

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Location: 6,328 - 16,513 nt. (total: 10,186 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

JTIP01000094.1 - Region 1 - RiPP-like

Download region GenBank file

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Location: 1 - 5,090 nt. (total: 5,090 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.