GCA_001656755.1 - 3 region(s)

Identified primary metabolite regions

JTIV01000006.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 6.1	gallic_acid_met	Aromatic	1,691	23,748	Gallic acid degradation B. sp. KLE	GALL	100%

JTIV01000230.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 201.1	Pyruvate2acetate-formate	SCFA	1	3,164	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

JTIV01000410.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 351.1	TPP_fatty_acids	Putative	6,813	22,074

No primary metabolite regions were found in these records:: JTIV01000001.1; JTIV01000002.1; JTIV01000003.1; JTIV01000004.1; JTIV01000005.1; JTIV01000007.1; JTIV01000008.1; JTIV01000009.1; JTIV01000010.1; JTIV01000011.1; JTIV01000012.1; JTIV01000013.1; JTIV01000014.1; JTIV01000015.1; JTIV01000016.1; JTIV01000017.1; JTIV01000018.1; JTIV01000019.1; JTIV01000020.1; JTIV01000022.1; JTIV01000023.1; JTIV01000024.1; JTIV01000025.1; JTIV01000026.1; JTIV01000027.1; JTIV01000028.1; JTIV01000029.1; JTIV01000030.1; JTIV01000031.1; JTIV01000032.1; JTIV01000033.1; JTIV01000034.1; JTIV01000035.1; JTIV01000036.1; JTIV01000037.1; JTIV01000038.1; JTIV01000039.1; JTIV01000040.1; JTIV01000041.1; JTIV01000043.1; JTIV01000044.1; JTIV01000045.1; JTIV01000046.1; JTIV01000047.1; JTIV01000048.1; JTIV01000050.1; JTIV01000051.1; JTIV01000053.1; JTIV01000054.1; JTIV01000055.1; JTIV01000056.1; JTIV01000057.1; JTIV01000058.1; JTIV01000059.1; JTIV01000060.1; JTIV01000061.1; JTIV01000062.1; JTIV01000063.1; JTIV01000064.1; JTIV01000065.1; JTIV01000066.1; JTIV01000067.1; JTIV01000068.1; JTIV01000069.1; JTIV01000070.1; JTIV01000071.1; JTIV01000073.1; JTIV01000074.1; JTIV01000075.1; JTIV01000076.1; JTIV01000077.1; JTIV01000078.1; JTIV01000079.1; JTIV01000080.1; JTIV01000081.1; JTIV01000082.1; JTIV01000083.1; JTIV01000084.1; JTIV01000085.1; JTIV01000087.1; JTIV01000088.1; JTIV01000089.1; JTIV01000090.1; JTIV01000091.1; JTIV01000092.1; JTIV01000093.1; JTIV01000094.1; JTIV01000096.1; JTIV01000098.1; JTIV01000099.1; JTIV01000100.1; JTIV01000101.1; JTIV01000102.1; JTIV01000103.1; JTIV01000104.1; JTIV01000105.1; JTIV01000108.1; JTIV01000109.1; JTIV01000111.1; JTIV01000113.1; JTIV01000115.1; JTIV01000116.1; JTIV01000117.1; JTIV01000118.1; JTIV01000122.1; JTIV01000124.1; JTIV01000125.1; JTIV01000126.1; JTIV01000127.1; JTIV01000128.1; JTIV01000129.1; JTIV01000130.1; JTIV01000131.1; JTIV01000132.1; JTIV01000134.1; JTIV01000135.1; JTIV01000136.1; JTIV01000137.1; JTIV01000138.1; JTIV01000140.1; JTIV01000141.1; JTIV01000142.1; JTIV01000143.1; JTIV01000144.1; JTIV01000145.1; JTIV01000147.1; JTIV01000148.1; JTIV01000149.1; JTIV01000150.1; JTIV01000151.1; JTIV01000152.1; JTIV01000153.1; JTIV01000154.1; JTIV01000155.1; JTIV01000156.1; JTIV01000157.1; JTIV01000158.1; JTIV01000159.1; JTIV01000160.1; JTIV01000161.1; JTIV01000162.1; JTIV01000163.1; JTIV01000164.1; JTIV01000166.1; JTIV01000167.1; JTIV01000168.1; JTIV01000169.1; JTIV01000170.1; JTIV01000171.1; JTIV01000173.1; JTIV01000174.1; JTIV01000175.1; JTIV01000176.1; JTIV01000177.1; JTIV01000178.1; JTIV01000179.1; JTIV01000180.1; JTIV01000181.1; JTIV01000182.1; JTIV01000183.1; JTIV01000184.1; JTIV01000185.1; JTIV01000186.1; JTIV01000187.1; JTIV01000188.1; JTIV01000189.1; JTIV01000190.1; JTIV01000192.1; JTIV01000193.1; JTIV01000194.1; JTIV01000195.1; JTIV01000196.1; JTIV01000198.1; JTIV01000199.1; JTIV01000200.1; JTIV01000202.1; JTIV01000203.1; JTIV01000204.1; JTIV01000205.1; JTIV01000206.1; JTIV01000207.1; JTIV01000208.1; JTIV01000209.1; JTIV01000211.1; JTIV01000212.1; JTIV01000214.1; JTIV01000216.1; JTIV01000217.1; JTIV01000218.1; JTIV01000219.1; JTIV01000220.1; JTIV01000221.1; JTIV01000222.1; JTIV01000223.1; JTIV01000224.1; JTIV01000225.1; JTIV01000226.1; JTIV01000227.1; JTIV01000228.1; JTIV01000232.1; JTIV01000233.1; JTIV01000235.1; JTIV01000236.1; JTIV01000237.1; JTIV01000238.1; JTIV01000239.1; JTIV01000240.1; JTIV01000241.1; JTIV01000242.1; JTIV01000244.1; JTIV01000245.1; JTIV01000246.1; JTIV01000247.1; JTIV01000249.1; JTIV01000250.1; JTIV01000251.1; JTIV01000252.1; JTIV01000253.1; JTIV01000254.1; JTIV01000257.1; JTIV01000258.1; JTIV01000259.1; JTIV01000260.1; JTIV01000261.1; JTIV01000264.1; JTIV01000265.1; JTIV01000266.1; JTIV01000267.1; JTIV01000268.1; JTIV01000269.1; JTIV01000270.1; JTIV01000271.1; JTIV01000273.1; JTIV01000274.1; JTIV01000275.1; JTIV01000276.1; JTIV01000277.1; JTIV01000278.1; JTIV01000279.1; JTIV01000280.1; JTIV01000281.1; JTIV01000282.1; JTIV01000283.1; JTIV01000284.1; JTIV01000285.1; JTIV01000288.1; JTIV01000289.1; JTIV01000290.1; JTIV01000292.1; JTIV01000293.1; JTIV01000295.1; JTIV01000296.1; JTIV01000297.1; JTIV01000298.1; JTIV01000299.1; JTIV01000300.1; JTIV01000301.1; JTIV01000303.1; JTIV01000305.1; JTIV01000306.1; JTIV01000308.1; JTIV01000310.1; JTIV01000312.1; JTIV01000313.1; JTIV01000315.1; JTIV01000316.1; JTIV01000317.1; JTIV01000318.1; JTIV01000319.1; JTIV01000320.1; JTIV01000321.1; JTIV01000322.1; JTIV01000323.1; JTIV01000324.1; JTIV01000325.1; JTIV01000326.1; JTIV01000327.1; JTIV01000328.1; JTIV01000329.1; JTIV01000330.1; JTIV01000331.1; JTIV01000332.1; JTIV01000333.1; JTIV01000334.1; JTIV01000336.1; JTIV01000338.1; JTIV01000339.1; JTIV01000340.1; JTIV01000341.1; JTIV01000342.1; JTIV01000343.1; JTIV01000344.1; JTIV01000346.1; JTIV01000347.1; JTIV01000348.1; JTIV01000349.1; JTIV01000350.1; JTIV01000351.1; JTIV01000353.1; JTIV01000354.1; JTIV01000355.1; JTIV01000356.1; JTIV01000357.1; JTIV01000358.1; JTIV01000359.1; JTIV01000360.1; JTIV01000361.1; JTIV01000362.1; JTIV01000363.1; JTIV01000364.1; JTIV01000365.1; JTIV01000366.1; JTIV01000367.1; JTIV01000368.1; JTIV01000369.1; JTIV01000370.1; JTIV01000371.1; JTIV01000372.1; JTIV01000373.1; JTIV01000374.1; JTIV01000375.1; JTIV01000376.1; JTIV01000377.1; JTIV01000378.1; JTIV01000380.1; JTIV01000382.1; JTIV01000383.1; JTIV01000384.1; JTIV01000385.1; JTIV01000386.1; JTIV01000387.1; JTIV01000388.1; JTIV01000389.1; JTIV01000390.1; JTIV01000392.1; JTIV01000393.1; JTIV01000394.1; JTIV01000396.1; JTIV01000397.1; JTIV01000398.1; JTIV01000399.1; JTIV01000402.1; JTIV01000403.1; JTIV01000405.1; JTIV01000406.1; JTIV01000407.1; JTIV01000408.1; JTIV01000409.1; JTIV01000413.1; JTIV01000414.1; JTIV01000415.1; JTIV01000417.1; JTIV01000418.1; JTIV01000419.1; JTIV01000420.1; JTIV01000421.1; JTIV01000422.1; JTIV01000423.1; JTIV01000425.1; JTIV01000426.1; JTIV01000427.1; JTIV01000428.1; JTIV01000429.1; JTIV01000430.1; JTIV01000431.1; JTIV01000432.1; JTIV01000433.1; JTIV01000434.1; JTIV01000435.1; JTIV01000436.1; JTIV01000437.1; JTIV01000438.1; JTIV01000439.1; JTIV01000441.1; JTIV01000442.1; JTIV01000443.1; JTIV01000444.1; JTIV01000445.1; JTIV01000446.1; JTIV01000447.1; JTIV01000449.1; JTIV01000450.1; JTIV01000451.1; JTIV01000452.1; JTIV01000453.1; JTIV01000454.1; JTIV01000456.1; JTIV01000457.1; JTIV01000458.1; JTIV01000459.1; JTIV01000460.1; JTIV01000461.1; JTIV01000463.1; JTIV01000466.1; JTIV01000468.1; JTIV01000469.1; JTIV01000470.1; JTIV01000471.1

Compact view

JTIV01000006.1 - Region 1 - gallic_acid_met

Download region GenBank file

Location: 1,691 - 23,748 nt. (total: 22,058 nt) Show pHMM detection rules used

gallic_acid_met: (minimum(1, [Flavoprotein, Semialdhyde_dh]) and gallic_acid)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JTIV01000230.1 - Region 1 - Pyruvate2acetate-formate

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Location: 1 - 3,164 nt. (total: 3,164 nt) Show pHMM detection rules used

Region on contig edge.

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

JTIV01000410.1 - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 6,813 - 22,074 nt. (total: 15,262 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.