GCA_001656835.1 - 2 region(s)

Identified primary metabolite regions

JTHT01000009.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 9.1	Pyruvate2acetate-formate	SCFA	17,023	40,273	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

JTHT01000058.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 58.1	TPP_fatty_acids	Putative	1	16,056

No primary metabolite regions were found in these records:: JTHT01000001.1; JTHT01000002.1; JTHT01000003.1; JTHT01000004.1; JTHT01000005.1; JTHT01000006.1; JTHT01000007.1; JTHT01000008.1; JTHT01000010.1; JTHT01000011.1; JTHT01000012.1; JTHT01000013.1; JTHT01000014.1; JTHT01000015.1; JTHT01000016.1; JTHT01000017.1; JTHT01000018.1; JTHT01000019.1; JTHT01000020.1; JTHT01000021.1; JTHT01000022.1; JTHT01000023.1; JTHT01000024.1; JTHT01000025.1; JTHT01000026.1; JTHT01000027.1; JTHT01000028.1; JTHT01000029.1; JTHT01000030.1; JTHT01000031.1; JTHT01000032.1; JTHT01000033.1; JTHT01000034.1; JTHT01000035.1; JTHT01000036.1; JTHT01000037.1; JTHT01000038.1; JTHT01000039.1; JTHT01000040.1; JTHT01000041.1; JTHT01000042.1; JTHT01000043.1; JTHT01000044.1; JTHT01000045.1; JTHT01000046.1; JTHT01000047.1; JTHT01000048.1; JTHT01000049.1; JTHT01000050.1; JTHT01000051.1; JTHT01000052.1; JTHT01000053.1; JTHT01000054.1; JTHT01000055.1; JTHT01000056.1; JTHT01000057.1; JTHT01000059.1; JTHT01000060.1; JTHT01000061.1; JTHT01000062.1; JTHT01000063.1; JTHT01000064.1; JTHT01000065.1; JTHT01000066.1; JTHT01000067.1; JTHT01000068.1; JTHT01000069.1; JTHT01000070.1; JTHT01000071.1; JTHT01000072.1; JTHT01000073.1; JTHT01000074.1; JTHT01000075.1; JTHT01000076.1; JTHT01000077.1; JTHT01000078.1; JTHT01000079.1; JTHT01000080.1; JTHT01000081.1; JTHT01000082.1; JTHT01000083.1; JTHT01000084.1; JTHT01000085.1; JTHT01000086.1; JTHT01000087.1; JTHT01000088.1; JTHT01000089.1; JTHT01000090.1; JTHT01000091.1; JTHT01000092.1; JTHT01000093.1; JTHT01000094.1; JTHT01000095.1; JTHT01000096.1; JTHT01000097.1; JTHT01000098.1; JTHT01000099.1; JTHT01000100.1; JTHT01000101.1; JTHT01000102.1; JTHT01000103.1; JTHT01000104.1; JTHT01000105.1; JTHT01000106.1; JTHT01000107.1; JTHT01000108.1; JTHT01000109.1; JTHT01000110.1; JTHT01000111.1; JTHT01000112.1; JTHT01000113.1; JTHT01000114.1; JTHT01000115.1; JTHT01000116.1; JTHT01000117.1; JTHT01000118.1; JTHT01000119.1; JTHT01000120.1; JTHT01000121.1; JTHT01000122.1; JTHT01000123.1; JTHT01000124.1; JTHT01000125.1

Compact view

JTHT01000009.1 - Region 1 - Pyruvate2acetate-formate

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Location: 17,023 - 40,273 nt. (total: 23,251 nt) Show pHMM detection rules used

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

JTHT01000058.1 - Region 1 - TPP_fatty_acids

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Location: 1 - 16,056 nt. (total: 16,056 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.