GCA_001657005.1 - 3 region(s)

Identified primary metabolite regions

JTIF01000134.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 124.1	TPP_fatty_acids	Putative	1	7,982

JTIF01000171.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 159.1	Pyruvate2acetate-formate	SCFA	1	13,037	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

JTIF01000239.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 218.1	gallic_acid_met	Aromatic	1	16,863	Gallic acid degradation B. sp. KLE	GALL	100%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 124.1	TPP_fatty_acids	Putative	1	7,982
Region 159.1	Pyruvate2acetate-formate	SCFA	1	13,037	Pyruvate to acetate-formate E. coli	PFL_acetate	100%
Region 218.1	gallic_acid_met	Aromatic	1	16,863	Gallic acid degradation B. sp. KLE	GALL	100%

No primary metabolite regions were found in these records:: JTIF01000001.1; JTIF01000002.1; JTIF01000003.1; JTIF01000004.1; JTIF01000005.1; JTIF01000006.1; JTIF01000008.1; JTIF01000009.1; JTIF01000010.1; JTIF01000012.1; JTIF01000013.1; JTIF01000015.1; JTIF01000016.1; JTIF01000017.1; JTIF01000018.1; JTIF01000019.1; JTIF01000020.1; JTIF01000021.1; JTIF01000022.1; JTIF01000023.1; JTIF01000024.1; JTIF01000025.1; JTIF01000027.1; JTIF01000028.1; JTIF01000029.1; JTIF01000030.1; JTIF01000031.1; JTIF01000032.1; JTIF01000033.1; JTIF01000034.1; JTIF01000035.1; JTIF01000036.1; JTIF01000037.1; JTIF01000038.1; JTIF01000039.1; JTIF01000040.1; JTIF01000041.1; JTIF01000042.1; JTIF01000043.1; JTIF01000044.1; JTIF01000045.1; JTIF01000046.1; JTIF01000047.1; JTIF01000048.1; JTIF01000049.1; JTIF01000050.1; JTIF01000051.1; JTIF01000052.1; JTIF01000053.1; JTIF01000054.1; JTIF01000055.1; JTIF01000056.1; JTIF01000057.1; JTIF01000058.1; JTIF01000059.1; JTIF01000060.1; JTIF01000061.1; JTIF01000062.1; JTIF01000063.1; JTIF01000064.1; JTIF01000065.1; JTIF01000066.1; JTIF01000067.1; JTIF01000068.1; JTIF01000069.1; JTIF01000070.1; JTIF01000071.1; JTIF01000072.1; JTIF01000073.1; JTIF01000074.1; JTIF01000075.1; JTIF01000076.1; JTIF01000077.1; JTIF01000078.1; JTIF01000079.1; JTIF01000080.1; JTIF01000081.1; JTIF01000082.1; JTIF01000084.1; JTIF01000085.1; JTIF01000086.1; JTIF01000088.1; JTIF01000089.1; JTIF01000091.1; JTIF01000092.1; JTIF01000093.1; JTIF01000094.1; JTIF01000095.1; JTIF01000097.1; JTIF01000098.1; JTIF01000099.1; JTIF01000100.1; JTIF01000101.1; JTIF01000102.1; JTIF01000103.1; JTIF01000104.1; JTIF01000105.1; JTIF01000106.1; JTIF01000107.1; JTIF01000108.1; JTIF01000109.1; JTIF01000110.1; JTIF01000111.1; JTIF01000112.1; JTIF01000113.1; JTIF01000114.1; JTIF01000115.1; JTIF01000116.1; JTIF01000117.1; JTIF01000119.1; JTIF01000120.1; JTIF01000121.1; JTIF01000122.1; JTIF01000124.1; JTIF01000125.1; JTIF01000126.1; JTIF01000127.1; JTIF01000128.1; JTIF01000129.1; JTIF01000130.1; JTIF01000131.1; JTIF01000132.1; JTIF01000133.1; JTIF01000135.1; JTIF01000136.1; JTIF01000137.1; JTIF01000138.1; JTIF01000139.1; JTIF01000140.1; JTIF01000141.1; JTIF01000142.1; JTIF01000143.1; JTIF01000144.1; JTIF01000146.1; JTIF01000147.1; JTIF01000148.1; JTIF01000149.1; JTIF01000150.1; JTIF01000151.1; JTIF01000152.1; JTIF01000153.1; JTIF01000154.1; JTIF01000155.1; JTIF01000156.1; JTIF01000158.1; JTIF01000159.1; JTIF01000160.1; JTIF01000161.1; JTIF01000162.1; JTIF01000163.1; JTIF01000164.1; JTIF01000165.1; JTIF01000166.1; JTIF01000167.1; JTIF01000168.1; JTIF01000169.1; JTIF01000170.1; JTIF01000172.1; JTIF01000173.1; JTIF01000174.1; JTIF01000175.1; JTIF01000176.1; JTIF01000177.1; JTIF01000178.1; JTIF01000180.1; JTIF01000182.1; JTIF01000183.1; JTIF01000184.1; JTIF01000185.1; JTIF01000186.1; JTIF01000187.1; JTIF01000188.1; JTIF01000189.1; JTIF01000191.1; JTIF01000193.1; JTIF01000194.1; JTIF01000195.1; JTIF01000196.1; JTIF01000197.1; JTIF01000198.1; JTIF01000199.1; JTIF01000200.1; JTIF01000201.1; JTIF01000202.1; JTIF01000203.1; JTIF01000204.1; JTIF01000205.1; JTIF01000206.1; JTIF01000207.1; JTIF01000208.1; JTIF01000209.1; JTIF01000210.1; JTIF01000211.1; JTIF01000212.1; JTIF01000213.1; JTIF01000214.1; JTIF01000215.1; JTIF01000219.1; JTIF01000220.1; JTIF01000221.1; JTIF01000222.1; JTIF01000224.1; JTIF01000225.1; JTIF01000226.1; JTIF01000227.1; JTIF01000229.1; JTIF01000230.1; JTIF01000231.1; JTIF01000232.1; JTIF01000233.1; JTIF01000234.1; JTIF01000235.1; JTIF01000236.1; JTIF01000237.1; JTIF01000238.1; JTIF01000240.1; JTIF01000241.1; JTIF01000242.1; JTIF01000243.1; JTIF01000244.1; JTIF01000245.1; JTIF01000246.1; JTIF01000247.1; JTIF01000248.1; JTIF01000249.1; JTIF01000250.1; JTIF01000251.1; JTIF01000252.1; JTIF01000253.1; JTIF01000254.1; JTIF01000256.1; JTIF01000257.1; JTIF01000258.1; JTIF01000260.1; JTIF01000262.1; JTIF01000263.1; JTIF01000264.1; JTIF01000265.1; JTIF01000266.1; JTIF01000267.1; JTIF01000268.1; JTIF01000269.1; JTIF01000270.1; JTIF01000271.1; JTIF01000272.1; JTIF01000273.1; JTIF01000274.1; JTIF01000275.1; JTIF01000276.1; JTIF01000277.1; JTIF01000278.1; JTIF01000279.1; JTIF01000280.1; JTIF01000281.1; JTIF01000282.1; JTIF01000283.1; JTIF01000284.1; JTIF01000285.1; JTIF01000286.1; JTIF01000287.1; JTIF01000288.1; JTIF01000289.1; JTIF01000290.1; JTIF01000291.1; JTIF01000293.1; JTIF01000294.1; JTIF01000295.1; JTIF01000296.1; JTIF01000297.1; JTIF01000298.1; JTIF01000299.1; JTIF01000300.1; JTIF01000301.1; JTIF01000302.1; JTIF01000303.1; JTIF01000307.1; JTIF01000308.1; JTIF01000311.1; JTIF01000312.1; JTIF01000315.1; JTIF01000316.1; JTIF01000318.1; JTIF01000321.1; JTIF01000322.1; JTIF01000324.1; JTIF01000327.1; JTIF01000328.1; JTIF01000331.1

Compact view

JTIF01000134.1 - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 1 - 7,982 nt. (total: 7,982 nt) Show pHMM detection rules used

Region on contig edge.

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

JTIF01000171.1 - Region 1 - Pyruvate2acetate-formate

Download region GenBank file

Location: 1 - 13,037 nt. (total: 13,037 nt) Show pHMM detection rules used

Region on contig edge.

Pyruvate2acetate-formate: ((PFL_acetate1 or PFL_acetate2) and Radical_SAM)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

JTIF01000239.1 - Region 1 - gallic_acid_met

Download region GenBank file

Location: 1 - 16,863 nt. (total: 16,863 nt) Show pHMM detection rules used

Region on contig edge.

gallic_acid_met: (minimum(1, [Flavoprotein, Semialdhyde_dh]) and gallic_acid)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters