GCA_001703885.1 - 2 region(s)

Identified primary metabolite regions

MBLS01000005.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 5.1	Nitrate_reductase	E-MGC	1,574	22,467	Nitrate reductase E. coli	NIR	40%

MBLS01000108.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 49.1	TPP_AA_metabolism	Putative	7,648	28,993

No primary metabolite regions were found in these records:: MBLS01000001.1; MBLS01000002.1; MBLS01000003.1; MBLS01000004.1; MBLS01000006.1; MBLS01000008.1; MBLS01000009.1; MBLS01000010.1; MBLS01000011.1; MBLS01000012.1; MBLS01000013.1; MBLS01000014.1; MBLS01000015.1; MBLS01000016.1; MBLS01000018.1; MBLS01000020.1; MBLS01000021.1; MBLS01000022.1; MBLS01000023.1; MBLS01000024.1; MBLS01000025.1; MBLS01000026.1; MBLS01000027.1; MBLS01000030.1; MBLS01000031.1; MBLS01000032.1; MBLS01000033.1; MBLS01000034.1; MBLS01000035.1; MBLS01000037.1; MBLS01000044.1; MBLS01000045.1; MBLS01000056.1; MBLS01000066.1; MBLS01000076.1; MBLS01000077.1; MBLS01000087.1; MBLS01000090.1; MBLS01000098.1; MBLS01000100.1; MBLS01000101.1; MBLS01000102.1; MBLS01000103.1; MBLS01000104.1; MBLS01000105.1; MBLS01000106.1; MBLS01000107.1; MBLS01000109.1; MBLS01000110.1; MBLS01000111.1; MBLS01000112.1; MBLS01000113.1; MBLS01000114.1; MBLS01000115.1; MBLS01000116.1; MBLS01000117.1; MBLS01000118.1; MBLS01000119.1; MBLS01000120.1; MBLS01000121.1; MBLS01000122.1; MBLS01000123.1; MBLS01000124.1; MBLS01000125.1; MBLS01000126.1; MBLS01000127.1; MBLS01000128.1; MBLS01000129.1; MBLS01000130.1; MBLS01000131.1; MBLS01000132.1; MBLS01000133.1; MBLS01000134.1; MBLS01000135.1; MBLS01000138.1; MBLS01000139.1; MBLS01000140.1; MBLS01000141.1; MBLS01000142.1; MBLS01000143.1; MBLS01000144.1; MBLS01000145.1; MBLS01000146.1; MBLS01000147.1; MBLS01000148.1; MBLS01000149.1; MBLS01000150.1; MBLS01000151.1; MBLS01000152.1; MBLS01000153.1; MBLS01000154.1; MBLS01000155.1; MBLS01000156.1; MBLS01000157.1; MBLS01000158.1; MBLS01000159.1; MBLS01000160.1; MBLS01000161.1; MBLS01000162.1; MBLS01000163.1; MBLS01000164.1; MBLS01000165.1; MBLS01000166.1; MBLS01000167.1; MBLS01000168.1; MBLS01000169.1; MBLS01000170.1; MBLS01000171.1; MBLS01000172.1; MBLS01000173.1; MBLS01000174.1; MBLS01000176.1; MBLS01000177.1; MBLS01000178.1; MBLS01000179.1; MBLS01000180.1; MBLS01000181.1; MBLS01000184.1; MBLS01000185.1; MBLS01000186.1

Compact view

MBLS01000005.1 - Region 1 - Nitrate_reductase

Download region GenBank file

Location: 1,574 - 22,467 nt. (total: 20,894 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

MBLS01000108.1 - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 7,648 - 28,993 nt. (total: 21,346 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.