GCA_001754025.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

LWKN01000001.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	lanthipeptide-class-ii	1	17,874

LWKN01000015.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	terpene	7,856	28,737

LWKN01000077.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 63.1	T3PKS	89,047	130,216

LWKN01000137.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 87.1	cyclic-lactone-autoinducer	96,998	116,756

Region	Type	From	To	Similarity
Region 1.1	lanthipeptide-class-ii	1	17,874
Region 14.1	terpene	7,856	28,737
Region 63.1	T3PKS	89,047	130,216
Region 87.1	cyclic-lactone-autoinducer	96,998	116,756

No secondary metabolite regions were found in these records:: LWKN01000002.1; LWKN01000004.1; LWKN01000005.1; LWKN01000006.1; LWKN01000007.1; LWKN01000008.1; LWKN01000009.1; LWKN01000010.1; LWKN01000011.1; LWKN01000012.1; LWKN01000013.1; LWKN01000014.1; LWKN01000016.1; LWKN01000017.1; LWKN01000018.1; LWKN01000019.1; LWKN01000020.1; LWKN01000021.1; LWKN01000022.1; LWKN01000023.1; LWKN01000024.1; LWKN01000025.1; LWKN01000026.1; LWKN01000027.1; LWKN01000029.1; LWKN01000030.1; LWKN01000031.1; LWKN01000032.1; LWKN01000035.1; LWKN01000036.1; LWKN01000037.1; LWKN01000038.1; LWKN01000039.1; LWKN01000040.1; LWKN01000041.1; LWKN01000042.1; LWKN01000043.1; LWKN01000044.1; LWKN01000045.1; LWKN01000046.1; LWKN01000047.1; LWKN01000048.1; LWKN01000049.1; LWKN01000051.1; LWKN01000054.1; LWKN01000056.1; LWKN01000057.1; LWKN01000058.1; LWKN01000059.1; LWKN01000060.1; LWKN01000061.1; LWKN01000062.1; LWKN01000064.1; LWKN01000065.1; LWKN01000066.1; LWKN01000067.1; LWKN01000068.1; LWKN01000072.1; LWKN01000073.1; LWKN01000075.1; LWKN01000080.1; LWKN01000084.1; LWKN01000086.1; LWKN01000089.1; LWKN01000091.1; LWKN01000093.1; LWKN01000094.1; LWKN01000095.1; LWKN01000098.1; LWKN01000099.1; LWKN01000100.1; LWKN01000101.1; LWKN01000102.1; LWKN01000103.1; LWKN01000104.1; LWKN01000105.1; LWKN01000106.1; LWKN01000108.1; LWKN01000113.1; LWKN01000116.1; LWKN01000121.1; LWKN01000131.1; LWKN01000132.1; LWKN01000138.1; LWKN01000139.1; LWKN01000140.1; LWKN01000144.1; LWKN01000147.1; LWKN01000148.1; LWKN01000149.1; LWKN01000150.1; LWKN01000153.1; LWKN01000156.1; LWKN01000158.1; LWKN01000159.1; LWKN01000161.1; LWKN01000167.1; LWKN01000170.1

Compact view

LWKN01000001.1 - Region 1 - lanthipeptide-class-ii

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Location: 1 - 17,874 nt. (total: 17,874 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg1_6 - Putative Class II

ctg1_7 leader / core peptide: MKKNLMNSAEESSGNVLEELNNAQLGMISGG - KKDhbKKNDhaDhaGDICDhbLDhbDhaECDHLADhbWVCC

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

ctg1_7 - Class II

Cleavage pHMM score: -2.30

RODEO score: 0

Monoisotopic mass: 2844.4 Da

Molecular weight: 2846.3 Da

Number of bridges: 4

Alternative weights: (assuming N unmodified Ser/Thr residues); 2864.3 Da N = 1; 2882.3 Da N = 2; 2900.3 Da N = 3

LWKN01000015.1 - Region 1 - terpene

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Location: 7,856 - 28,737 nt. (total: 20,882 nt) Show pHMM detection rules used

terpene: (Terpene_synth or Terpene_synth_C or phytoene_synt or Lycopene_cycl or terpene_cyclase or NapT7 or fung_ggpps or fung_ggpps2 or trichodiene_synth or TRI5)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

LWKN01000077.1 - Region 1 - T3PKS

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Location: 89,047 - 130,216 nt. (total: 41,170 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

LWKN01000137.1 - Region 1 - cyclic-lactone-autoinducer

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Location: 96,998 - 116,756 nt. (total: 19,759 nt) Show pHMM detection rules used

Region on contig edge.

cyclic-lactone-autoinducer: (TIGR04223 or AgrB)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.