GCA_001906975.1 - 5 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

LXIN01000022.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 22.1	RiPP-like	4,116	14,295

LXIN01000045.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	RiPP-like	4,522	14,812

LXIN01000086.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 86.1	T3PKS	1	31,355

LXIN01000101.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 101.1	lanthipeptide-class-ii	1,935	17,297	salivaricin A	RiPP:Lanthipeptide	37%

LXIN01000110.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 110.1	RiPP-like	1	4,253

Region	Type	From	To	Most similar known cluster	Similarity
Region 22.1	RiPP-like	4,116	14,295
Region 45.1	RiPP-like	4,522	14,812
Region 86.1	T3PKS	1	31,355
Region 101.1	lanthipeptide-class-ii	1,935	17,297	salivaricin A	RiPP:Lanthipeptide	37%
Region 110.1	RiPP-like	1	4,253

No secondary metabolite regions were found in these records:: LXIN01000001.1; LXIN01000002.1; LXIN01000003.1; LXIN01000004.1; LXIN01000005.1; LXIN01000006.1; LXIN01000007.1; LXIN01000008.1; LXIN01000009.1; LXIN01000010.1; LXIN01000011.1; LXIN01000012.1; LXIN01000013.1; LXIN01000014.1; LXIN01000015.1; LXIN01000016.1; LXIN01000017.1; LXIN01000018.1; LXIN01000019.1; LXIN01000020.1; LXIN01000021.1; LXIN01000023.1; LXIN01000024.1; LXIN01000025.1; LXIN01000026.1; LXIN01000027.1; LXIN01000028.1; LXIN01000029.1; LXIN01000030.1; LXIN01000031.1; LXIN01000032.1; LXIN01000033.1; LXIN01000034.1; LXIN01000035.1; LXIN01000036.1; LXIN01000037.1; LXIN01000038.1; LXIN01000039.1; LXIN01000040.1; LXIN01000041.1; LXIN01000042.1; LXIN01000043.1; LXIN01000044.1; LXIN01000046.1; LXIN01000047.1; LXIN01000048.1; LXIN01000049.1; LXIN01000050.1; LXIN01000051.1; LXIN01000052.1; LXIN01000053.1; LXIN01000054.1; LXIN01000055.1; LXIN01000056.1; LXIN01000057.1; LXIN01000058.1; LXIN01000059.1; LXIN01000060.1; LXIN01000061.1; LXIN01000062.1; LXIN01000063.1; LXIN01000064.1; LXIN01000065.1; LXIN01000066.1; LXIN01000067.1; LXIN01000068.1; LXIN01000069.1; LXIN01000070.1; LXIN01000071.1; LXIN01000072.1; LXIN01000073.1; LXIN01000074.1; LXIN01000075.1; LXIN01000076.1; LXIN01000077.1; LXIN01000078.1; LXIN01000079.1; LXIN01000080.1; LXIN01000081.1; LXIN01000082.1; LXIN01000083.1; LXIN01000084.1; LXIN01000085.1; LXIN01000087.1; LXIN01000088.1; LXIN01000089.1; LXIN01000090.1; LXIN01000091.1; LXIN01000092.1; LXIN01000093.1; LXIN01000094.1; LXIN01000095.1; LXIN01000096.1; LXIN01000097.1; LXIN01000098.1; LXIN01000099.1; LXIN01000100.1; LXIN01000102.1; LXIN01000103.1; LXIN01000104.1; LXIN01000105.1; LXIN01000106.1; LXIN01000107.1; LXIN01000108.1; LXIN01000109.1; LXIN01000111.1; LXIN01000112.1; LXIN01000113.1; LXIN01000114.1; LXIN01000115.1; LXIN01000116.1; LXIN01000117.1; LXIN01000118.1; LXIN01000119.1; LXIN01000120.1; LXIN01000121.1; LXIN01000122.1; LXIN01000123.1; LXIN01000124.1; LXIN01000125.1; LXIN01000126.1; LXIN01000127.1; LXIN01000128.1; LXIN01000129.1; LXIN01000130.1; LXIN01000131.1; LXIN01000132.1; LXIN01000133.1; LXIN01000134.1; LXIN01000135.1; LXIN01000136.1; LXIN01000137.1; LXIN01000138.1; LXIN01000139.1; LXIN01000140.1; LXIN01000141.1; LXIN01000142.1; LXIN01000143.1; LXIN01000144.1; LXIN01000145.1; LXIN01000146.1; LXIN01000147.1; LXIN01000148.1; LXIN01000149.1; LXIN01000150.1; LXIN01000151.1; LXIN01000152.1; LXIN01000153.1; LXIN01000154.1; LXIN01000155.1; LXIN01000156.1; LXIN01000157.1; LXIN01000158.1; LXIN01000159.1; LXIN01000160.1; LXIN01000161.1; LXIN01000162.1; LXIN01000163.1; LXIN01000164.1; LXIN01000165.1; LXIN01000166.1; LXIN01000167.1; LXIN01000168.1; LXIN01000169.1; LXIN01000170.1; LXIN01000171.1; LXIN01000172.1; LXIN01000173.1; LXIN01000174.1; LXIN01000175.1; LXIN01000176.1; LXIN01000177.1; LXIN01000178.1; LXIN01000179.1; LXIN01000180.1; LXIN01000181.1; LXIN01000182.1; LXIN01000183.1; LXIN01000184.1; LXIN01000185.1; LXIN01000186.1; LXIN01000187.1; LXIN01000188.1; LXIN01000189.1; LXIN01000190.1; LXIN01000191.1; LXIN01000192.1; LXIN01000193.1; LXIN01000194.1; LXIN01000195.1; LXIN01000196.1; LXIN01000197.1; LXIN01000198.1; LXIN01000199.1; LXIN01000200.1; LXIN01000201.1; LXIN01000202.1; LXIN01000203.1; LXIN01000204.1; LXIN01000205.1; LXIN01000206.1; LXIN01000207.1; LXIN01000208.1; LXIN01000209.1; LXIN01000210.1; LXIN01000211.1; LXIN01000212.1; LXIN01000213.1; LXIN01000214.1; LXIN01000215.1; LXIN01000216.1; LXIN01000217.1; LXIN01000218.1; LXIN01000219.1; LXIN01000220.1; LXIN01000221.1; LXIN01000222.1; LXIN01000223.1; LXIN01000224.1; LXIN01000225.1; LXIN01000226.1; LXIN01000227.1; LXIN01000228.1; LXIN01000229.1; LXIN01000230.1; LXIN01000231.1; LXIN01000232.1; LXIN01000233.1; LXIN01000234.1; LXIN01000235.1; LXIN01000236.1; LXIN01000237.1; LXIN01000238.1; LXIN01000239.1; LXIN01000240.1; LXIN01000241.1; LXIN01000242.1

Compact view

LXIN01000022.1 - Region 1 - RiPP-like

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Location: 4,116 - 14,295 nt. (total: 10,180 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

LXIN01000045.1 - Region 1 - RiPP-like

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Location: 4,522 - 14,812 nt. (total: 10,291 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

LXIN01000086.1 - Region 1 - T3PKS

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Location: 1 - 31,355 nt. (total: 31,355 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

LXIN01000101.1 - Region 1 - lanthipeptide-class-ii

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Location: 1,935 - 17,297 nt. (total: 15,363 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-ii: cds(LANC_like and DUF4135)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg101_8 - Putative Class II

allorf_11716_11850 leader / core peptide: MLSLNNAIEEVSEKELMEVAGG - KRGDhaGWIADhbIDhbDDCPNDhaVFVCC

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

Lanthipeptides

Core peptide predictions

allorf_11716_11850 - Class II

Cleavage pHMM score: 4.40

RODEO score: 0

Monoisotopic mass: 2299.1 Da

Molecular weight: 2300.6 Da

Number of bridges: 3

Alternative weights: (assuming N unmodified Ser/Thr residues); 2318.6 Da N = 1

LXIN01000110.1 - Region 1 - RiPP-like

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Location: 1 - 4,253 nt. (total: 4,253 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.