GCA_001907055.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

LXIM01000006.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	RiPP-like	28,101	40,197

LXIM01000014.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	T3PKS	32,139	73,305

LXIM01000023.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 23.1	RiPP-like	28,167	46,961

LXIM01000031.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 31.1	lassopeptide	1	15,123

Region	Type	From	To	Similarity
Region 6.1	RiPP-like	28,101	40,197
Region 14.1	T3PKS	32,139	73,305
Region 23.1	RiPP-like	28,167	46,961
Region 31.1	lassopeptide	1	15,123

No secondary metabolite regions were found in these records:: LXIM01000001.1; LXIM01000002.1; LXIM01000003.1; LXIM01000004.1; LXIM01000005.1; LXIM01000007.1; LXIM01000008.1; LXIM01000009.1; LXIM01000010.1; LXIM01000011.1; LXIM01000012.1; LXIM01000013.1; LXIM01000015.1; LXIM01000016.1; LXIM01000017.1; LXIM01000018.1; LXIM01000019.1; LXIM01000020.1; LXIM01000021.1; LXIM01000022.1; LXIM01000024.1; LXIM01000025.1; LXIM01000026.1; LXIM01000027.1; LXIM01000028.1; LXIM01000029.1; LXIM01000030.1; LXIM01000032.1; LXIM01000033.1; LXIM01000034.1; LXIM01000035.1; LXIM01000036.1; LXIM01000037.1; LXIM01000038.1; LXIM01000039.1; LXIM01000040.1; LXIM01000041.1; LXIM01000042.1; LXIM01000043.1; LXIM01000044.1; LXIM01000045.1; LXIM01000046.1; LXIM01000047.1; LXIM01000048.1; LXIM01000049.1; LXIM01000050.1; LXIM01000051.1; LXIM01000052.1; LXIM01000053.1

Compact view

LXIM01000006.1 - Region 1 - RiPP-like

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Location: 28,101 - 40,197 nt. (total: 12,097 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

LXIM01000014.1 - Region 1 - T3PKS

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Location: 32,139 - 73,305 nt. (total: 41,167 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

LXIM01000023.1 - Region 1 - RiPP-like

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Location: 28,167 - 46,961 nt. (total: 18,795 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

LXIM01000031.1 - Region 1 - lassopeptide

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Location: 1 - 15,123 nt. (total: 15,123 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Lasso peptides

Similar known gene clusters

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.