GCA_001982095.1 - 2 region(s)

Identified primary metabolite regions

MKGA01000029.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 48.1	TPP_fatty_acids	Putative	19,311	45,012

MKGA01000005.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 71.1	Pyruvate2acetate-formate	SCFA	1	16,177	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 48.1	TPP_fatty_acids	Putative	19,311	45,012
Region 71.1	Pyruvate2acetate-formate	SCFA	1	16,177	Pyruvate to acetate-formate E. coli	PFL_acetate	100%

No primary metabolite regions were found in these records:: MKGA01000001.1; MKGA01000010.1; MKGA01000100.1; MKGA01000101.1; MKGA01000102.1; MKGA01000103.1; MKGA01000104.1; MKGA01000105.1; MKGA01000106.1; MKGA01000107.1; MKGA01000108.1; MKGA01000109.1; MKGA01000011.1; MKGA01000110.1; MKGA01000111.1; MKGA01000112.1; MKGA01000113.1; MKGA01000114.1; MKGA01000115.1; MKGA01000116.1; MKGA01000117.1; MKGA01000118.1; MKGA01000119.1; MKGA01000012.1; MKGA01000120.1; MKGA01000121.1; MKGA01000122.1; MKGA01000123.1; MKGA01000124.1; MKGA01000125.1; MKGA01000013.1; MKGA01000014.1; MKGA01000015.1; MKGA01000016.1; MKGA01000017.1; MKGA01000018.1; MKGA01000019.1; MKGA01000002.1; MKGA01000020.1; MKGA01000021.1; MKGA01000022.1; MKGA01000023.1; MKGA01000024.1; MKGA01000025.1; MKGA01000026.1; MKGA01000027.1; MKGA01000028.1; MKGA01000003.1; MKGA01000030.1; MKGA01000031.1; MKGA01000032.1; MKGA01000033.1; MKGA01000034.1; MKGA01000035.1; MKGA01000036.1; MKGA01000037.1; MKGA01000038.1; MKGA01000039.1; MKGA01000004.1; MKGA01000040.1; MKGA01000041.1; MKGA01000042.1; MKGA01000043.1; MKGA01000044.1; MKGA01000045.1; MKGA01000046.1; MKGA01000047.1; MKGA01000048.1; MKGA01000049.1; MKGA01000050.1; MKGA01000051.1; MKGA01000052.1; MKGA01000053.1; MKGA01000054.1; MKGA01000055.1; MKGA01000056.1; MKGA01000057.1; MKGA01000058.1; MKGA01000059.1; MKGA01000006.1; MKGA01000060.1; MKGA01000061.1; MKGA01000062.1; MKGA01000063.1; MKGA01000064.1; MKGA01000065.1; MKGA01000066.1; MKGA01000067.1; MKGA01000068.1; MKGA01000069.1; MKGA01000007.1; MKGA01000070.1; MKGA01000071.1; MKGA01000072.1; MKGA01000073.1; MKGA01000074.1; MKGA01000075.1; MKGA01000076.1; MKGA01000077.1; MKGA01000078.1; MKGA01000079.1; MKGA01000008.1; MKGA01000080.1; MKGA01000081.1; MKGA01000082.1; MKGA01000083.1; MKGA01000084.1; MKGA01000085.1; MKGA01000086.1; MKGA01000087.1; MKGA01000088.1; MKGA01000089.1; MKGA01000009.1; MKGA01000090.1; MKGA01000091.1; MKGA01000092.1; MKGA01000093.1; MKGA01000094.1; MKGA01000095.1; MKGA01000096.1; MKGA01000097.1; MKGA01000098.1; MKGA01000099.1

Compact view

MKGA01000029.1 - Region 1 - TPP_fatty_acids

Download region GenBank file

Location: 19,311 - 45,012 nt. (total: 25,702 nt) Show pHMM detection rules used

TPP_fatty_acids: (TPP_enzyme_C and (minimum(2, [ACD1_car, ACP_syn_III_C, AcetylCoA_hyd_C, AcetylCoA_hydro, Acyl-CoA_dh_1, Acyl-CoA_dh_2, Butyrate_kinase, CT_Propionyl_CoA1, CT_Propionyl_CoA2, CT_Propionyl_CoA3, Carboxyl_trans, CoA_trans, CoA_trans_230_acto, CoA_trans_2_CAF, CoA_trans_6_Glutaconate, E1_dh, ECH_1, ECH_2, HBT, HBT_2, HCDH, HpaB, Ketoacyl-synt_C, Thiolase_C, Thiolase_N, adh_short, adh_short_C2]) or FA_synthesis) and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and not (POR or POR_N))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

MKGA01000005.1 - Region 1 - Pyruvate2acetate-formate