GCA_002128485.1 - 2 region(s)

Identified primary metabolite regions

MIME01000055.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 46.1	TPP_AA_metabolism	Putative	1	18,643

MIME01000070.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 61.1	Nitrate_reductase	E-MGC	3,764	20,428	Nitrate reductase E. coli	NIR	40%

Region	Type	Class	From	To	Most similar known cluster	Similarity
Region 46.1	TPP_AA_metabolism	Putative	1	18,643
Region 61.1	Nitrate_reductase	E-MGC	3,764	20,428	Nitrate reductase E. coli	NIR	40%

No primary metabolite regions were found in these records:: MIME01000001.1; MIME01000002.1; MIME01000003.1; MIME01000004.1; MIME01000005.1; MIME01000006.1; MIME01000007.1; MIME01000008.1; MIME01000009.1; MIME01000010.1; MIME01000011.1; MIME01000012.1; MIME01000013.1; MIME01000014.1; MIME01000015.1; MIME01000016.1; MIME01000017.1; MIME01000018.1; MIME01000019.1; MIME01000020.1; MIME01000021.1; MIME01000022.1; MIME01000023.1; MIME01000024.1; MIME01000025.1; MIME01000026.1; MIME01000027.1; MIME01000028.1; MIME01000029.1; MIME01000030.1; MIME01000031.1; MIME01000032.1; MIME01000033.1; MIME01000034.1; MIME01000035.1; MIME01000036.1; MIME01000037.1; MIME01000038.1; MIME01000039.1; MIME01000040.1; MIME01000044.1; MIME01000051.1; MIME01000052.1; MIME01000053.1; MIME01000054.1; MIME01000056.1; MIME01000057.1; MIME01000058.1; MIME01000059.1; MIME01000060.1; MIME01000061.1; MIME01000062.1; MIME01000063.1; MIME01000064.1; MIME01000065.1; MIME01000066.1; MIME01000067.1; MIME01000068.1; MIME01000069.1; MIME01000071.1; MIME01000072.1; MIME01000073.1; MIME01000074.1; MIME01000075.1; MIME01000076.1; MIME01000077.1; MIME01000078.1; MIME01000079.1; MIME01000080.1; MIME01000081.1; MIME01000082.1; MIME01000083.1; MIME01000084.1; MIME01000085.1; MIME01000086.1; MIME01000087.1; MIME01000088.1; MIME01000089.1; MIME01000090.1; MIME01000091.1; MIME01000092.1; MIME01000093.1; MIME01000094.1; MIME01000095.1; MIME01000096.1; MIME01000097.1; MIME01000098.1; MIME01000099.1; MIME01000100.1; MIME01000101.1; MIME01000102.1; MIME01000103.1; MIME01000104.1; MIME01000105.1; MIME01000106.1; MIME01000107.1; MIME01000108.1; MIME01000109.1; MIME01000110.1; MIME01000111.1; MIME01000112.1; MIME01000113.1; MIME01000114.1; MIME01000115.1; MIME01000116.1; MIME01000117.1; MIME01000118.1; MIME01000119.1; MIME01000120.1; MIME01000121.1; MIME01000122.1; MIME01000123.1; MIME01000124.1; MIME01000125.1; MIME01000126.1; MIME01000127.1; MIME01000128.1; MIME01000129.1; MIME01000130.1; MIME01000131.1; MIME01000132.1; MIME01000133.1; MIME01000134.1; MIME01000135.1; MIME01000136.1; MIME01000137.1; MIME01000138.1; MIME01000139.1; MIME01000140.1; MIME01000141.1; MIME01000142.1; MIME01000143.1; MIME01000144.1; MIME01000145.1

Compact view

MIME01000055.1 - Region 1 - TPP_AA_metabolism

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Location: 1 - 18,643 nt. (total: 18,643 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

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core biosynthetic genes

additional biosynthetic genes

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Similar known gene clusters

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MIME01000070.1 - Region 1 - Nitrate_reductase