GCA_002159305.1 - 3 region(s)

Identified primary metabolite regions

NFHN01000012.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 4.1	Nitrate_reductase	E-MGC	7,659	34,126	Nitrate reductase E. coli	NIR	40%

NFHN01000006.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 56.1	TPP_AA_metabolism	Putative	20,047	57,270

NFHN01000007.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 67.1	pdu	SCFA-other	16,145	54,644	Propanediol degradation S. enterica	PDU	66%

No primary metabolite regions were found in these records:: NFHN01000001.1; NFHN01000010.1; NFHN01000011.1; NFHN01000013.1; NFHN01000014.1; NFHN01000015.1; NFHN01000016.1; NFHN01000017.1; NFHN01000018.1; NFHN01000019.1; NFHN01000002.1; NFHN01000020.1; NFHN01000021.1; NFHN01000022.1; NFHN01000023.1; NFHN01000024.1; NFHN01000025.1; NFHN01000026.1; NFHN01000027.1; NFHN01000028.1; NFHN01000029.1; NFHN01000003.1; NFHN01000030.1; NFHN01000031.1; NFHN01000032.1; NFHN01000033.1; NFHN01000034.1; NFHN01000035.1; NFHN01000036.1; NFHN01000037.1; NFHN01000038.1; NFHN01000039.1; NFHN01000004.1; NFHN01000040.1; NFHN01000041.1; NFHN01000042.1; NFHN01000043.1; NFHN01000044.1; NFHN01000045.1; NFHN01000046.1; NFHN01000047.1; NFHN01000048.1; NFHN01000049.1; NFHN01000005.1; NFHN01000050.1; NFHN01000051.1; NFHN01000052.1; NFHN01000053.1; NFHN01000054.1; NFHN01000055.1; NFHN01000056.1; NFHN01000057.1; NFHN01000058.1; NFHN01000059.1; NFHN01000060.1; NFHN01000061.1; NFHN01000062.1; NFHN01000063.1; NFHN01000064.1; NFHN01000065.1; NFHN01000066.1; NFHN01000067.1; NFHN01000068.1; NFHN01000069.1; NFHN01000070.1; NFHN01000071.1; NFHN01000072.1; NFHN01000073.1; NFHN01000074.1; NFHN01000075.1; NFHN01000076.1; NFHN01000077.1; NFHN01000078.1; NFHN01000079.1; NFHN01000008.1; NFHN01000080.1; NFHN01000081.1; NFHN01000082.1; NFHN01000083.1; NFHN01000084.1; NFHN01000085.1; NFHN01000086.1; NFHN01000087.1; NFHN01000088.1; NFHN01000089.1; NFHN01000009.1; NFHN01000090.1; NFHN01000091.1; NFHN01000092.1; NFHN01000093.1; NFHN01000094.1; NFHN01000095.1; NFHN01000096.1; NFHN01000097.1

Compact view

NFHN01000012.1 - Region 1 - Nitrate_reductase

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Location: 7,659 - 34,126 nt. (total: 26,468 nt) Show pHMM detection rules used

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

NFHN01000006.1 - Region 1 - TPP_AA_metabolism

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Location: 20,047 - 57,270 nt. (total: 37,224 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

NFHN01000007.1 - Region 1 - pdu

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Location: 16,145 - 54,644 nt. (total: 38,500 nt) Show pHMM detection rules used

pdu: (minimum(2, [Aldedh, BMC, Cob_adeno_trans, EutN_CcmL, Fe-ADH, Fe-ADH_2, PDU_like, PTAC, PduV-EutP]) and Dehydratase_MU and Dehydratase_SU and Dehydratase_LU)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters