GCA_002160565.1 - 3 region(s)

Identified primary metabolite regions

NFKV01000010.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 2.1	pdu	SCFA-other	16,145	54,644	Propanediol degradation S. enterica	PDU	66%

NFKV01000014.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 6.1	Nitrate_reductase	E-MGC	15,258	41,725	Nitrate reductase E. coli	NIR	40%

NFKV01000006.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 56.1	TPP_AA_metabolism	Putative	8,060	45,283

No primary metabolite regions were found in these records:: NFKV01000001.1; NFKV01000011.1; NFKV01000012.1; NFKV01000013.1; NFKV01000015.1; NFKV01000016.1; NFKV01000017.1; NFKV01000018.1; NFKV01000019.1; NFKV01000002.1; NFKV01000020.1; NFKV01000021.1; NFKV01000022.1; NFKV01000023.1; NFKV01000024.1; NFKV01000025.1; NFKV01000026.1; NFKV01000027.1; NFKV01000028.1; NFKV01000029.1; NFKV01000003.1; NFKV01000030.1; NFKV01000031.1; NFKV01000032.1; NFKV01000033.1; NFKV01000034.1; NFKV01000035.1; NFKV01000036.1; NFKV01000037.1; NFKV01000038.1; NFKV01000039.1; NFKV01000004.1; NFKV01000040.1; NFKV01000041.1; NFKV01000042.1; NFKV01000043.1; NFKV01000044.1; NFKV01000045.1; NFKV01000046.1; NFKV01000047.1; NFKV01000048.1; NFKV01000049.1; NFKV01000005.1; NFKV01000050.1; NFKV01000051.1; NFKV01000052.1; NFKV01000053.1; NFKV01000054.1; NFKV01000055.1; NFKV01000056.1; NFKV01000057.1; NFKV01000058.1; NFKV01000059.1; NFKV01000060.1; NFKV01000061.1; NFKV01000062.1; NFKV01000063.1; NFKV01000064.1; NFKV01000065.1; NFKV01000066.1; NFKV01000067.1; NFKV01000068.1; NFKV01000069.1; NFKV01000007.1; NFKV01000070.1; NFKV01000071.1; NFKV01000072.1; NFKV01000073.1; NFKV01000074.1; NFKV01000075.1; NFKV01000076.1; NFKV01000077.1; NFKV01000078.1; NFKV01000079.1; NFKV01000008.1; NFKV01000080.1; NFKV01000081.1; NFKV01000082.1; NFKV01000083.1; NFKV01000084.1; NFKV01000085.1; NFKV01000086.1; NFKV01000009.1

Compact view

NFKV01000010.1 - Region 1 - pdu

Download region GenBank file

Location: 16,145 - 54,644 nt. (total: 38,500 nt) Show pHMM detection rules used

pdu: (minimum(2, [Aldedh, BMC, Cob_adeno_trans, EutN_CcmL, Fe-ADH, Fe-ADH_2, PDU_like, PTAC, PduV-EutP]) and Dehydratase_MU and Dehydratase_SU and Dehydratase_LU)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

NFKV01000014.1 - Region 1 - Nitrate_reductase

Download region GenBank file

Location: 15,258 - 41,725 nt. (total: 26,468 nt) Show pHMM detection rules used

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

NFKV01000006.1 - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 8,060 - 45,283 nt. (total: 37,224 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.