GCA_002250405.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NDYW01000017.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 8.1	RiPP-like	35,772	43,263	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	16%

NDYW01000036.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 29.1	RiPP-like	1	4,382	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	50%

NDYW01000006.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 43.1	T3PKS	56,869	92,126

No secondary metabolite regions were found in these records:: NDYW01000010.1; NDYW01000011.1; NDYW01000012.1; NDYW01000013.1; NDYW01000014.1; NDYW01000015.1; NDYW01000016.1; NDYW01000018.1; NDYW01000019.1; NDYW01000001.1; NDYW01000020.1; NDYW01000021.1; NDYW01000022.1; NDYW01000023.1; NDYW01000024.1; NDYW01000025.1; NDYW01000026.1; NDYW01000027.1; NDYW01000028.1; NDYW01000029.1; NDYW01000002.1; NDYW01000030.1; NDYW01000031.1; NDYW01000032.1; NDYW01000033.1; NDYW01000034.1; NDYW01000035.1; NDYW01000037.1; NDYW01000038.1; NDYW01000039.1; NDYW01000003.1; NDYW01000040.1; NDYW01000041.1; NDYW01000042.1; NDYW01000043.1; NDYW01000044.1; NDYW01000045.1; NDYW01000046.1; NDYW01000004.1; NDYW01000005.1; NDYW01000007.1; NDYW01000008.1; NDYW01000009.1

Compact view

NDYW01000017.1 - Region 1 - RiPP-like

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Location: 35,772 - 43,263 nt. (total: 7,492 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

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core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

NDYW01000036.1 - Region 1 - RiPP-like

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Location: 1 - 4,382 nt. (total: 4,382 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

NDYW01000006.1 - Region 1 - T3PKS

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Location: 56,869 - 92,126 nt. (total: 35,258 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.