GCA_002253745.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NGPE01000107.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	RiPP-like	12,119	24,269

NGPE01000114.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 19.1	RiPP-like	1	6,381	gassericin T	RiPP	22%

NGPE01000129.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 34.1	T3PKS	21,243	62,400

NGPE01000141.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 46.1	RiPP-like	1	2,862

Region	Type	From	To	Most similar known cluster	Similarity
Region 11.1	RiPP-like	12,119	24,269
Region 19.1	RiPP-like	1	6,381	gassericin T	RiPP	22%
Region 34.1	T3PKS	21,243	62,400
Region 46.1	RiPP-like	1	2,862

No secondary metabolite regions were found in these records:: NGPE01000001.1; NGPE01000098.1; NGPE01000099.1; NGPE01000100.1; NGPE01000101.1; NGPE01000102.1; NGPE01000103.1; NGPE01000104.1; NGPE01000105.1; NGPE01000106.1; NGPE01000011.1; NGPE01000108.1; NGPE01000109.1; NGPE01000110.1; NGPE01000111.1; NGPE01000112.1; NGPE01000113.1; NGPE01000115.1; NGPE01000116.1; NGPE01000117.1; NGPE01000118.1; NGPE01000119.1; NGPE01000120.1; NGPE01000121.1; NGPE01000122.1; NGPE01000123.1; NGPE01000124.1; NGPE01000125.1; NGPE01000126.1; NGPE01000127.1; NGPE01000128.1; NGPE01000130.1; NGPE01000131.1; NGPE01000132.1; NGPE01000133.1; NGPE01000134.1; NGPE01000135.1; NGPE01000136.1; NGPE01000137.1; NGPE01000138.1; NGPE01000139.1; NGPE01000140.1; NGPE01000142.1; NGPE01000143.1; NGPE01000144.1; NGPE01000145.1; NGPE01000146.1; NGPE01000147.1; NGPE01000148.1; NGPE01000149.1; NGPE01000150.1; NGPE01000151.1; NGPE01000152.1; NGPE01000153.1; NGPE01000154.1; NGPE01000155.1; NGPE01000156.1; NGPE01000157.1; NGPE01000158.1; NGPE01000159.1; NGPE01000160.1; NGPE01000161.1; NGPE01000162.1; NGPE01000002.1; NGPE01000022.1; NGPE01000003.1; NGPE01000033.1; NGPE01000004.1; NGPE01000044.1; NGPE01000054.1; NGPE01000064.1; NGPE01000070.1; NGPE01000071.1; NGPE01000072.1; NGPE01000073.1; NGPE01000074.1; NGPE01000075.1; NGPE01000076.1; NGPE01000077.1; NGPE01000078.1; NGPE01000079.1; NGPE01000080.1; NGPE01000081.1; NGPE01000082.1; NGPE01000083.1; NGPE01000084.1; NGPE01000085.1; NGPE01000086.1; NGPE01000087.1; NGPE01000088.1; NGPE01000089.1; NGPE01000090.1; NGPE01000091.1; NGPE01000092.1; NGPE01000093.1; NGPE01000094.1; NGPE01000095.1; NGPE01000096.1; NGPE01000097.1

Compact view

NGPE01000107.1 - Region 1 - RiPP-like

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Location: 12,119 - 24,269 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

NGPE01000114.1 - Region 1 - RiPP-like

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Location: 1 - 6,381 nt. (total: 6,381 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

NGPE01000129.1 - Region 1 - T3PKS

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Location: 21,243 - 62,400 nt. (total: 41,158 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

NGPE01000141.1 - Region 1 - RiPP-like

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Location: 1 - 2,862 nt. (total: 2,862 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.