GCA_002253755.1 - 2 region(s)

Identified primary metabolite regions

NGPG01000223.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 64.1	Nitrate_reductase	E-MGC	1	17,021	Nitrate reductase E. coli	NIR	40%

NGPG01000033.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 144.1	TPP_AA_metabolism	Putative	1	29,211

No primary metabolite regions were found in these records:: NGPG01000001.1; NGPG01000010.1; NGPG01000100.1; NGPG01000101.1; NGPG01000102.1; NGPG01000103.1; NGPG01000104.1; NGPG01000105.1; NGPG01000106.1; NGPG01000107.1; NGPG01000108.1; NGPG01000109.1; NGPG01000011.1; NGPG01000110.1; NGPG01000111.1; NGPG01000112.1; NGPG01000113.1; NGPG01000114.1; NGPG01000115.1; NGPG01000116.1; NGPG01000117.1; NGPG01000118.1; NGPG01000119.1; NGPG01000012.1; NGPG01000120.1; NGPG01000121.1; NGPG01000122.1; NGPG01000123.1; NGPG01000124.1; NGPG01000125.1; NGPG01000126.1; NGPG01000127.1; NGPG01000128.1; NGPG01000129.1; NGPG01000013.1; NGPG01000133.1; NGPG01000014.1; NGPG01000144.1; NGPG01000015.1; NGPG01000155.1; NGPG01000016.1; NGPG01000166.1; NGPG01000017.1; NGPG01000177.1; NGPG01000018.1; NGPG01000187.1; NGPG01000019.1; NGPG01000198.1; NGPG01000002.1; NGPG01000020.1; NGPG01000209.1; NGPG01000021.1; NGPG01000213.1; NGPG01000214.1; NGPG01000215.1; NGPG01000216.1; NGPG01000217.1; NGPG01000218.1; NGPG01000219.1; NGPG01000022.1; NGPG01000220.1; NGPG01000221.1; NGPG01000222.1; NGPG01000224.1; NGPG01000225.1; NGPG01000226.1; NGPG01000227.1; NGPG01000228.1; NGPG01000229.1; NGPG01000023.1; NGPG01000230.1; NGPG01000231.1; NGPG01000232.1; NGPG01000233.1; NGPG01000234.1; NGPG01000235.1; NGPG01000236.1; NGPG01000237.1; NGPG01000238.1; NGPG01000239.1; NGPG01000024.1; NGPG01000240.1; NGPG01000241.1; NGPG01000242.1; NGPG01000243.1; NGPG01000244.1; NGPG01000245.1; NGPG01000246.1; NGPG01000247.1; NGPG01000248.1; NGPG01000249.1; NGPG01000025.1; NGPG01000250.1; NGPG01000251.1; NGPG01000252.1; NGPG01000253.1; NGPG01000254.1; NGPG01000255.1; NGPG01000256.1; NGPG01000257.1; NGPG01000258.1; NGPG01000259.1; NGPG01000026.1; NGPG01000260.1; NGPG01000261.1; NGPG01000262.1; NGPG01000263.1; NGPG01000264.1; NGPG01000265.1; NGPG01000266.1; NGPG01000267.1; NGPG01000268.1; NGPG01000269.1; NGPG01000027.1; NGPG01000270.1; NGPG01000271.1; NGPG01000272.1; NGPG01000273.1; NGPG01000274.1; NGPG01000275.1; NGPG01000276.1; NGPG01000277.1; NGPG01000278.1; NGPG01000279.1; NGPG01000028.1; NGPG01000280.1; NGPG01000281.1; NGPG01000282.1; NGPG01000283.1; NGPG01000284.1; NGPG01000285.1; NGPG01000286.1; NGPG01000287.1; NGPG01000288.1; NGPG01000289.1; NGPG01000029.1; NGPG01000290.1; NGPG01000291.1; NGPG01000003.1; NGPG01000030.1; NGPG01000031.1; NGPG01000032.1; NGPG01000034.1; NGPG01000035.1; NGPG01000036.1; NGPG01000037.1; NGPG01000038.1; NGPG01000039.1; NGPG01000004.1; NGPG01000040.1; NGPG01000041.1; NGPG01000042.1; NGPG01000043.1; NGPG01000044.1; NGPG01000045.1; NGPG01000046.1; NGPG01000047.1; NGPG01000048.1; NGPG01000049.1; NGPG01000005.1; NGPG01000050.1; NGPG01000051.1; NGPG01000052.1; NGPG01000053.1; NGPG01000054.1; NGPG01000055.1; NGPG01000056.1; NGPG01000057.1; NGPG01000058.1; NGPG01000059.1; NGPG01000006.1; NGPG01000060.1; NGPG01000061.1; NGPG01000062.1; NGPG01000063.1; NGPG01000064.1; NGPG01000065.1; NGPG01000066.1; NGPG01000067.1; NGPG01000068.1; NGPG01000069.1; NGPG01000007.1; NGPG01000070.1; NGPG01000071.1; NGPG01000072.1; NGPG01000073.1; NGPG01000074.1; NGPG01000075.1; NGPG01000076.1; NGPG01000077.1; NGPG01000078.1; NGPG01000079.1; NGPG01000008.1; NGPG01000080.1; NGPG01000081.1; NGPG01000082.1; NGPG01000083.1; NGPG01000084.1; NGPG01000085.1; NGPG01000086.1; NGPG01000087.1; NGPG01000088.1; NGPG01000089.1; NGPG01000009.1; NGPG01000090.1; NGPG01000091.1; NGPG01000092.1; NGPG01000093.1; NGPG01000094.1; NGPG01000095.1; NGPG01000096.1; NGPG01000097.1; NGPG01000098.1; NGPG01000099.1

Compact view

NGPG01000223.1 - Region 1 - Nitrate_reductase

Download region GenBank file

Location: 1 - 17,021 nt. (total: 17,021 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

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Gene details

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KnownClusterBlast

Similar known gene clusters

NGPG01000033.1 - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 1 - 29,211 nt. (total: 29,211 nt) Show pHMM detection rules used

Region on contig edge.

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.