GCA_002253825.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NGPL01000106.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 2.1	RiPP-like	64,949	75,743

NGPL01000045.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 37.1	RiPP-like	1,925	11,641	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	16%

NGPL01000084.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 75.1	T3PKS	1	22,423

Region	Type	From	To	Most similar known cluster	Similarity
Region 2.1	RiPP-like	64,949	75,743
Region 37.1	RiPP-like	1,925	11,641	salivaricin CRL1328 α peptide / salivaricin CRL1328 β peptide	RiPP	16%
Region 75.1	T3PKS	1	22,423

No secondary metabolite regions were found in these records:: NGPL01000010.1; NGPL01000011.1; NGPL01000012.1; NGPL01000013.1; NGPL01000014.1; NGPL01000015.1; NGPL01000016.1; NGPL01000017.1; NGPL01000018.1; NGPL01000019.1; NGPL01000020.1; NGPL01000021.1; NGPL01000022.1; NGPL01000023.1; NGPL01000024.1; NGPL01000025.1; NGPL01000026.1; NGPL01000027.1; NGPL01000028.1; NGPL01000029.1; NGPL01000030.1; NGPL01000031.1; NGPL01000032.1; NGPL01000033.1; NGPL01000034.1; NGPL01000035.1; NGPL01000036.1; NGPL01000037.1; NGPL01000038.1; NGPL01000039.1; NGPL01000040.1; NGPL01000041.1; NGPL01000042.1; NGPL01000043.1; NGPL01000044.1; NGPL01000046.1; NGPL01000047.1; NGPL01000048.1; NGPL01000049.1; NGPL01000050.1; NGPL01000051.1; NGPL01000052.1; NGPL01000053.1; NGPL01000054.1; NGPL01000055.1; NGPL01000056.1; NGPL01000057.1; NGPL01000058.1; NGPL01000059.1; NGPL01000060.1; NGPL01000061.1; NGPL01000062.1; NGPL01000063.1; NGPL01000064.1; NGPL01000065.1; NGPL01000066.1; NGPL01000067.1; NGPL01000068.1; NGPL01000069.1; NGPL01000070.1; NGPL01000071.1; NGPL01000072.1; NGPL01000073.1; NGPL01000074.1; NGPL01000075.1; NGPL01000076.1; NGPL01000077.1; NGPL01000078.1; NGPL01000079.1; NGPL01000008.1; NGPL01000080.1; NGPL01000081.1; NGPL01000009.1; NGPL01000095.1

Compact view

NGPL01000106.1 - Region 1 - RiPP-like

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Location: 64,949 - 75,743 nt. (total: 10,795 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

NGPL01000045.1 - Region 1 - RiPP-like

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Location: 1,925 - 11,641 nt. (total: 9,717 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

NGPL01000084.1 - Region 1 - T3PKS

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Location: 1 - 22,423 nt. (total: 22,423 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.