GCA_002253835.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NGPM01000015.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 6.1	RiPP-like	10,356	22,506

NGPM01000041.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 32.1	RiPP-like	2,271	12,379	gassericin T	RiPP	33%

NGPM01000054.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 45.1	T3PKS	22,395	63,552

NGPM01000062.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 53.1	lassopeptide	1	5,112

Region	Type	From	To	Most similar known cluster	Similarity
Region 6.1	RiPP-like	10,356	22,506
Region 32.1	RiPP-like	2,271	12,379	gassericin T	RiPP	33%
Region 45.1	T3PKS	22,395	63,552
Region 53.1	lassopeptide	1	5,112

No secondary metabolite regions were found in these records:: NGPM01000010.1; NGPM01000109.1; NGPM01000012.1; NGPM01000013.1; NGPM01000014.1; NGPM01000016.1; NGPM01000017.1; NGPM01000018.1; NGPM01000019.1; NGPM01000020.1; NGPM01000021.1; NGPM01000022.1; NGPM01000023.1; NGPM01000024.1; NGPM01000025.1; NGPM01000026.1; NGPM01000027.1; NGPM01000028.1; NGPM01000029.1; NGPM01000030.1; NGPM01000031.1; NGPM01000032.1; NGPM01000033.1; NGPM01000034.1; NGPM01000035.1; NGPM01000036.1; NGPM01000037.1; NGPM01000038.1; NGPM01000039.1; NGPM01000040.1; NGPM01000042.1; NGPM01000043.1; NGPM01000044.1; NGPM01000045.1; NGPM01000046.1; NGPM01000047.1; NGPM01000048.1; NGPM01000049.1; NGPM01000050.1; NGPM01000051.1; NGPM01000052.1; NGPM01000053.1; NGPM01000055.1; NGPM01000056.1; NGPM01000057.1; NGPM01000058.1; NGPM01000059.1; NGPM01000060.1; NGPM01000061.1; NGPM01000063.1; NGPM01000064.1; NGPM01000065.1; NGPM01000066.1; NGPM01000067.1; NGPM01000068.1; NGPM01000069.1; NGPM01000070.1; NGPM01000071.1; NGPM01000072.1; NGPM01000073.1; NGPM01000074.1; NGPM01000075.1; NGPM01000076.1; NGPM01000077.1; NGPM01000078.1; NGPM01000079.1; NGPM01000080.1; NGPM01000081.1; NGPM01000082.1; NGPM01000083.1; NGPM01000084.1; NGPM01000085.1; NGPM01000087.1; NGPM01000098.1

Compact view

NGPM01000015.1 - Region 1 - RiPP-like

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Location: 10,356 - 22,506 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

NGPM01000041.1 - Region 1 - RiPP-like

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Location: 2,271 - 12,379 nt. (total: 10,109 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

NGPM01000054.1 - Region 1 - T3PKS

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Location: 22,395 - 63,552 nt. (total: 41,158 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

NGPM01000062.1 - Region 1 - lassopeptide

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Location: 1 - 5,112 nt. (total: 5,112 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Lasso peptides

Similar known gene clusters

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.