GCA_002253905.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NGPN01000098.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	RiPP-like	59,833	70,257

NGPN01000013.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 11.1	T3PKS	74,495	115,652

NGPN01000018.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 16.1	RiPP-like	32,233	42,525

Region	Type	From	To	Similarity
Region 1.1	RiPP-like	59,833	70,257
Region 11.1	T3PKS	74,495	115,652
Region 16.1	RiPP-like	32,233	42,525

No secondary metabolite regions were found in these records:: NGPN01000004.1; NGPN01000005.1; NGPN01000006.1; NGPN01000007.1; NGPN01000008.1; NGPN01000009.1; NGPN01000010.1; NGPN01000011.1; NGPN01000012.1; NGPN01000014.1; NGPN01000015.1; NGPN01000016.1; NGPN01000017.1; NGPN01000019.1; NGPN01000020.1; NGPN01000021.1; NGPN01000022.1; NGPN01000023.1; NGPN01000024.1; NGPN01000025.1; NGPN01000026.1; NGPN01000027.1; NGPN01000028.1; NGPN01000029.1; NGPN01000030.1; NGPN01000031.1; NGPN01000032.1; NGPN01000033.1; NGPN01000034.1; NGPN01000035.1; NGPN01000036.1; NGPN01000037.1; NGPN01000038.1; NGPN01000039.1; NGPN01000040.1; NGPN01000041.1; NGPN01000042.1; NGPN01000043.1; NGPN01000044.1; NGPN01000045.1; NGPN01000046.1; NGPN01000047.1; NGPN01000048.1; NGPN01000049.1; NGPN01000050.1; NGPN01000051.1; NGPN01000052.1; NGPN01000053.1; NGPN01000054.1; NGPN01000055.1; NGPN01000056.1; NGPN01000057.1; NGPN01000058.1; NGPN01000059.1; NGPN01000060.1; NGPN01000061.1; NGPN01000062.1; NGPN01000003.1; NGPN01000063.1; NGPN01000064.1; NGPN01000068.1; NGPN01000079.1; NGPN01000090.1

Compact view

NGPN01000098.1 - Region 1 - RiPP-like

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Location: 59,833 - 70,257 nt. (total: 10,425 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

NGPN01000013.1 - Region 1 - T3PKS

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Location: 74,495 - 115,652 nt. (total: 41,158 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

NGPN01000018.1 - Region 1 - RiPP-like

Download region GenBank file

Download region SVG

Location: 32,233 - 42,525 nt. (total: 10,293 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.