GCA_002254025.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NGPV01000025.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	T3PKS	74,495	115,652

NGPV01000027.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 14.1	RiPP-like	32,369	42,660

NGPV01000070.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 57.1	lassopeptide	1	5,103

NGPV01000091.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 79.1	RiPP-like	59,833	70,258

Region	Type	From	To	Similarity
Region 12.1	T3PKS	74,495	115,652
Region 14.1	RiPP-like	32,369	42,660
Region 57.1	lassopeptide	1	5,103
Region 79.1	RiPP-like	59,833	70,258

No secondary metabolite regions were found in these records:: NGPV01000102.1; NGPV01000113.1; NGPV01000016.1; NGPV01000017.1; NGPV01000018.1; NGPV01000019.1; NGPV01000020.1; NGPV01000021.1; NGPV01000022.1; NGPV01000023.1; NGPV01000024.1; NGPV01000026.1; NGPV01000028.1; NGPV01000029.1; NGPV01000030.1; NGPV01000031.1; NGPV01000032.1; NGPV01000033.1; NGPV01000034.1; NGPV01000035.1; NGPV01000036.1; NGPV01000037.1; NGPV01000038.1; NGPV01000039.1; NGPV01000040.1; NGPV01000041.1; NGPV01000042.1; NGPV01000043.1; NGPV01000044.1; NGPV01000045.1; NGPV01000046.1; NGPV01000047.1; NGPV01000048.1; NGPV01000049.1; NGPV01000050.1; NGPV01000051.1; NGPV01000052.1; NGPV01000053.1; NGPV01000054.1; NGPV01000055.1; NGPV01000056.1; NGPV01000057.1; NGPV01000058.1; NGPV01000059.1; NGPV01000060.1; NGPV01000061.1; NGPV01000062.1; NGPV01000063.1; NGPV01000064.1; NGPV01000065.1; NGPV01000066.1; NGPV01000067.1; NGPV01000068.1; NGPV01000069.1; NGPV01000071.1; NGPV01000072.1; NGPV01000073.1; NGPV01000074.1; NGPV01000075.1; NGPV01000076.1; NGPV01000077.1; NGPV01000078.1; NGPV01000079.1; NGPV01000080.1; NGPV01000081.1; NGPV01000082.1; NGPV01000009.1; NGPV01000083.1; NGPV01000084.1; NGPV01000085.1; NGPV01000086.1; NGPV01000087.1; NGPV01000088.1; NGPV01000089.1; NGPV01000090.1

Compact view

NGPV01000025.1 - Region 1 - T3PKS

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Location: 74,495 - 115,652 nt. (total: 41,158 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

NGPV01000027.1 - Region 1 - RiPP-like

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Location: 32,369 - 42,660 nt. (total: 10,292 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

NGPV01000070.1 - Region 1 - lassopeptide

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Location: 1 - 5,103 nt. (total: 5,103 nt) Show pHMM detection rules used

Region on contig edge.

lassopeptide: (PF13471 and Asn_synthase or micJ25 or mcjC)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Lasso peptides

Similar known gene clusters

No matches found.

Lasso peptide predictions

Lassopeptides - No core peptides found.

Lasso peptides

Core peptide predictions

No core peptides found.

NGPV01000091.1 - Region 1 - RiPP-like

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Location: 59,833 - 70,258 nt. (total: 10,426 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.