GCA_002254105.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NGPX01000046.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	RiPP-like	58,757	70,907

NGPX01000005.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 44.1	RiPP-like	1	21,260	gassericin T	RiPP	33%

NGPX01000068.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 64.1	T3PKS	1	28,800

NGPX01000009.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 72.1	RiPP-like	1	7,807

Region	Type	From	To	Most similar known cluster	Similarity
Region 40.1	RiPP-like	58,757	70,907
Region 44.1	RiPP-like	1	21,260	gassericin T	RiPP	33%
Region 64.1	T3PKS	1	28,800
Region 72.1	RiPP-like	1	7,807

No secondary metabolite regions were found in these records:: NGPX01000010.1; NGPX01000100.1; NGPX01000011.1; NGPX01000012.1; NGPX01000013.1; NGPX01000014.1; NGPX01000015.1; NGPX01000016.1; NGPX01000017.1; NGPX01000018.1; NGPX01000019.1; NGPX01000020.1; NGPX01000021.1; NGPX01000022.1; NGPX01000023.1; NGPX01000024.1; NGPX01000025.1; NGPX01000026.1; NGPX01000027.1; NGPX01000028.1; NGPX01000029.1; NGPX01000003.1; NGPX01000030.1; NGPX01000031.1; NGPX01000032.1; NGPX01000033.1; NGPX01000034.1; NGPX01000035.1; NGPX01000036.1; NGPX01000037.1; NGPX01000038.1; NGPX01000039.1; NGPX01000004.1; NGPX01000040.1; NGPX01000041.1; NGPX01000042.1; NGPX01000043.1; NGPX01000044.1; NGPX01000045.1; NGPX01000047.1; NGPX01000048.1; NGPX01000049.1; NGPX01000050.1; NGPX01000051.1; NGPX01000052.1; NGPX01000053.1; NGPX01000054.1; NGPX01000055.1; NGPX01000056.1; NGPX01000057.1; NGPX01000058.1; NGPX01000059.1; NGPX01000006.1; NGPX01000060.1; NGPX01000061.1; NGPX01000062.1; NGPX01000063.1; NGPX01000064.1; NGPX01000065.1; NGPX01000066.1; NGPX01000067.1; NGPX01000069.1; NGPX01000007.1; NGPX01000070.1; NGPX01000071.1; NGPX01000072.1; NGPX01000079.1; NGPX01000008.1; NGPX01000090.1

Compact view

NGPX01000046.1 - Region 1 - RiPP-like

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Location: 58,757 - 70,907 nt. (total: 12,151 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

NGPX01000005.1 - Region 1 - RiPP-like

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Location: 1 - 21,260 nt. (total: 21,260 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

NGPX01000068.1 - Region 1 - T3PKS

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Location: 1 - 28,800 nt. (total: 28,800 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

NGPX01000009.1 - Region 1 - RiPP-like

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Download region SVG

Location: 1 - 7,807 nt. (total: 7,807 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.