GCA_002254175.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NGQA01000033.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 28.1	RiPP-like	69,493	80,533
Region 28.2	RiPP-like	145,999	153,805

NGQA01000005.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 56.1	RiPP-like	37,268	58,870	gassericin T	RiPP	33%

NGQA01000066.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 57.1	T3PKS	1	28,972

Region	Type	From	To	Most similar known cluster	Similarity
Region 28.1	RiPP-like	69,493	80,533
Region 28.2	RiPP-like	145,999	153,805
Region 56.1	RiPP-like	37,268	58,870	gassericin T	RiPP	33%
Region 57.1	T3PKS	1	28,972

No secondary metabolite regions were found in these records:: NGQA01000009.1; NGQA01000097.1; NGQA01000010.1; NGQA01000011.1; NGQA01000012.1; NGQA01000013.1; NGQA01000014.1; NGQA01000015.1; NGQA01000016.1; NGQA01000017.1; NGQA01000018.1; NGQA01000001.1; NGQA01000019.1; NGQA01000020.1; NGQA01000021.1; NGQA01000022.1; NGQA01000023.1; NGQA01000024.1; NGQA01000025.1; NGQA01000026.1; NGQA01000027.1; NGQA01000028.1; NGQA01000002.1; NGQA01000029.1; NGQA01000030.1; NGQA01000031.1; NGQA01000032.1; NGQA01000034.1; NGQA01000035.1; NGQA01000036.1; NGQA01000037.1; NGQA01000038.1; NGQA01000003.1; NGQA01000039.1; NGQA01000040.1; NGQA01000041.1; NGQA01000042.1; NGQA01000043.1; NGQA01000044.1; NGQA01000045.1; NGQA01000046.1; NGQA01000047.1; NGQA01000048.1; NGQA01000004.1; NGQA01000049.1; NGQA01000050.1; NGQA01000051.1; NGQA01000052.1; NGQA01000053.1; NGQA01000054.1; NGQA01000055.1; NGQA01000056.1; NGQA01000057.1; NGQA01000058.1; NGQA01000006.1; NGQA01000077.1; NGQA01000007.1; NGQA01000088.1; NGQA01000008.1

Compact view

NGQA01000033.1 - Region 1 - RiPP-like

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Location: 69,493 - 80,533 nt. (total: 11,041 nt) Show pHMM detection rules used

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

NGQA01000033.1 - Region 2 - RiPP-like

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Location: 145,999 - 153,805 nt. (total: 7,807 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

NGQA01000005.1 - Region 1 - RiPP-like

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Location: 37,268 - 58,870 nt. (total: 21,603 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

NGQA01000066.1 - Region 1 - T3PKS

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Location: 1 - 28,972 nt. (total: 28,972 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.