GCA_002254175.1 - 2 region(s)

Identified primary metabolite regions

NGQA01000018.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 11.1	Nitrate_reductase	E-MGC	1	19,164	Nitrate reductase E. coli	NIR	40%

NGQA01000002.1

Region	Type	Class	From	To	Most similar known cluster		Similarity
Region 23.1	TPP_AA_metabolism	Putative	5,466	44,447

No primary metabolite regions were found in these records:: NGQA01000009.1; NGQA01000097.1; NGQA01000010.1; NGQA01000011.1; NGQA01000012.1; NGQA01000013.1; NGQA01000014.1; NGQA01000015.1; NGQA01000016.1; NGQA01000017.1; NGQA01000001.1; NGQA01000019.1; NGQA01000020.1; NGQA01000021.1; NGQA01000022.1; NGQA01000023.1; NGQA01000024.1; NGQA01000025.1; NGQA01000026.1; NGQA01000027.1; NGQA01000028.1; NGQA01000029.1; NGQA01000030.1; NGQA01000031.1; NGQA01000032.1; NGQA01000033.1; NGQA01000034.1; NGQA01000035.1; NGQA01000036.1; NGQA01000037.1; NGQA01000038.1; NGQA01000003.1; NGQA01000039.1; NGQA01000040.1; NGQA01000041.1; NGQA01000042.1; NGQA01000043.1; NGQA01000044.1; NGQA01000045.1; NGQA01000046.1; NGQA01000047.1; NGQA01000048.1; NGQA01000004.1; NGQA01000049.1; NGQA01000050.1; NGQA01000051.1; NGQA01000052.1; NGQA01000053.1; NGQA01000054.1; NGQA01000055.1; NGQA01000056.1; NGQA01000057.1; NGQA01000058.1; NGQA01000005.1; NGQA01000066.1; NGQA01000006.1; NGQA01000077.1; NGQA01000007.1; NGQA01000088.1; NGQA01000008.1

Compact view

NGQA01000018.1 - Region 1 - Nitrate_reductase

Download region GenBank file

Location: 1 - 19,164 nt. (total: 19,164 nt) Show pHMM detection rules used

Region on contig edge.

Nitrate_reductase: (Nitr_red_bet_C and Nitrate_red_del and Nitrate_red_gam and Molybdopterin and minimum(2, [Fer4_11, Molybdopterin, Molydop_binding, Nitr_red_alph_N]))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

NGQA01000002.1 - Region 1 - TPP_AA_metabolism

Download region GenBank file

Location: 5,466 - 44,447 nt. (total: 38,982 nt) Show pHMM detection rules used

TPP_AA_metabolism: (TPP_enzyme_C and not (PFL-like or PFL_6_pcresol or PFL_9_tma or Gly_radical or Gly_430_pcre or Gly_8-9_TMA or PFL_acetate1 or PFL_acetate2 or Gly_radical_scatole or PFL_proline or PFL_toluene) and minimum(2, [ALS_ss_C, AlaDh_PNT_C, Arginase, BKACE, BcrAD_BadFG, Beta_elim_lyase, CPSase_L_D2, Cys_Met_Meta_PP, ELFV_dehydrog, GRDB, Glu_syn_central, Glu_synthase, Gly_reductase, HAAA1, HG2B1, HG2B2, HGD-D, HleuD1, HleuD2, HleuS1, HleuS2, Homoserine_dh, ILVD_EDD, IlvC, Lactoyl-CoA1, Lactoyl-CoA2, Lyase_aromatic, MAAL_C, OKR_DC_1_5_lysine, OKR_DC_1_5_ornithine, OKR_DC_1_7_arginine, OKR_DC_1_C, OTCace, PALP, Proline_reductase, Sacchrp_dh_C, TPL, Thr_dehydrat_C, TnaA, Urocanase]) and not (POR or POR_N or PFOR_II))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

resistance genes

encapsulation genes

electron transport genes

other genes

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.