GCA_002254255.1 - 3 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NGQF01000017.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 9.1	RiPP-like	31,828	42,120

NGQF01000002.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 12.1	RiPP-like	59,833	70,257

NGQF01000022.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 15.1	T3PKS	74,495	115,652

Region	Type	From	To	Similarity
Region 9.1	RiPP-like	31,828	42,120
Region 12.1	RiPP-like	59,833	70,257
Region 15.1	T3PKS	74,495	115,652

No secondary metabolite regions were found in these records:: NGQF01000001.1; NGQF01000010.1; NGQF01000011.1; NGQF01000012.1; NGQF01000013.1; NGQF01000014.1; NGQF01000015.1; NGQF01000016.1; NGQF01000018.1; NGQF01000019.1; NGQF01000020.1; NGQF01000021.1; NGQF01000023.1; NGQF01000024.1; NGQF01000025.1; NGQF01000026.1; NGQF01000027.1; NGQF01000028.1; NGQF01000029.1; NGQF01000003.1; NGQF01000030.1; NGQF01000031.1; NGQF01000032.1; NGQF01000033.1; NGQF01000034.1; NGQF01000035.1; NGQF01000036.1; NGQF01000037.1; NGQF01000038.1; NGQF01000039.1; NGQF01000004.1; NGQF01000040.1; NGQF01000041.1; NGQF01000042.1; NGQF01000043.1; NGQF01000044.1; NGQF01000045.1; NGQF01000046.1; NGQF01000047.1; NGQF01000048.1; NGQF01000049.1; NGQF01000005.1; NGQF01000050.1; NGQF01000051.1; NGQF01000052.1; NGQF01000053.1; NGQF01000055.1; NGQF01000006.1; NGQF01000066.1; NGQF01000007.1; NGQF01000077.1; NGQF01000008.1; NGQF01000087.1; NGQF01000009.1; NGQF01000097.1

Compact view

NGQF01000017.1 - Region 1 - RiPP-like

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Location: 31,828 - 42,120 nt. (total: 10,293 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

NGQF01000002.1 - Region 1 - RiPP-like

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Location: 59,833 - 70,257 nt. (total: 10,425 nt) Show pHMM detection rules used

Region on contig edge.

RiPP-like: (strepbact or Antimicrobial14 or Bacteriocin_IId or BacteriocIIc_cy or Bacteriocin_II or Bacteriocin_IIi or Lactococcin or Antimicrobial17 or Lactococcin_972 or Bacteriocin_IIc or LcnG-beta or Cloacin or Linocin_M18 or TIGR03651 or TIGR03693 or TIGR03601 or TIGR03795 or TIGR03975 or DUF692 or TIGR01193)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

NGQF01000022.1 - Region 1 - T3PKS

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Location: 74,495 - 115,652 nt. (total: 41,158 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.