GCA_002271555.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NPCF01000013.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 13.1	ectoine,lanthipeptide-class-iii	40,415	64,178	ectoine	Other	75%

NPCF01000059.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 53.1	T3PKS	22,708	63,808

NPCF01000080.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 73.1	lanthipeptide-class-i	38,931	63,438	chejuenolide A / chejuenolide B	Polyketide	7%

NPCF01000113.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 105.1	siderophore	1	9,341

No secondary metabolite regions were found in these records:: NPCF01000001.1; NPCF01000002.1; NPCF01000003.1; NPCF01000004.1; NPCF01000005.1; NPCF01000006.1; NPCF01000007.1; NPCF01000008.1; NPCF01000009.1; NPCF01000010.1; NPCF01000011.1; NPCF01000012.1; NPCF01000014.1; NPCF01000015.1; NPCF01000016.1; NPCF01000020.1; NPCF01000021.1; NPCF01000022.1; NPCF01000023.1; NPCF01000024.1; NPCF01000025.1; NPCF01000026.1; NPCF01000027.1; NPCF01000028.1; NPCF01000029.1; NPCF01000030.1; NPCF01000031.1; NPCF01000032.1; NPCF01000033.1; NPCF01000034.1; NPCF01000035.1; NPCF01000036.1; NPCF01000037.1; NPCF01000038.1; NPCF01000039.1; NPCF01000040.1; NPCF01000041.1; NPCF01000042.1; NPCF01000043.1; NPCF01000044.1; NPCF01000046.1; NPCF01000048.1; NPCF01000049.1; NPCF01000051.1; NPCF01000052.1; NPCF01000053.1; NPCF01000054.1; NPCF01000055.1; NPCF01000056.1; NPCF01000057.1; NPCF01000058.1; NPCF01000060.1; NPCF01000061.1; NPCF01000062.1; NPCF01000063.1; NPCF01000064.1; NPCF01000066.1; NPCF01000067.1; NPCF01000068.1; NPCF01000069.1; NPCF01000070.1; NPCF01000071.1; NPCF01000072.1; NPCF01000073.1; NPCF01000074.1; NPCF01000075.1; NPCF01000076.1; NPCF01000077.1; NPCF01000078.1; NPCF01000079.1; NPCF01000081.1; NPCF01000082.1; NPCF01000083.1; NPCF01000084.1; NPCF01000085.1; NPCF01000086.1; NPCF01000087.1; NPCF01000088.1; NPCF01000090.1; NPCF01000091.1; NPCF01000092.1; NPCF01000093.1; NPCF01000094.1; NPCF01000095.1; NPCF01000096.1; NPCF01000097.1; NPCF01000098.1; NPCF01000099.1; NPCF01000100.1; NPCF01000101.1; NPCF01000102.1; NPCF01000103.1; NPCF01000104.1; NPCF01000105.1; NPCF01000106.1; NPCF01000107.1; NPCF01000108.1; NPCF01000109.1; NPCF01000110.1; NPCF01000111.1; NPCF01000112.1; NPCF01000114.1; NPCF01000115.1; NPCF01000116.1; NPCF01000117.1; NPCF01000118.1; NPCF01000119.1; NPCF01000120.1; NPCF01000121.1; NPCF01000122.1; NPCF01000123.1; NPCF01000124.1; NPCF01000125.1; NPCF01000126.1; NPCF01000127.1; NPCF01000128.1; NPCF01000129.1; NPCF01000130.1

Compact view

NPCF01000013.1 - Region 1 - ectoine,lanthipeptide-class-iii

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Location: 40,415 - 64,178 nt. (total: 23,764 nt) Show pHMM detection rules used

ectoine: ectoine_synt
lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg13_48 - Putative Class III

ctg13_49 leader / core peptide: MNQVLELQKLSYNEESGQPAVD - KDhbPDhbDhbFDhbDhbDhbDhbDhbIDhbDhbLDhaDhbVDhaNNC
ctg13_50 leader / core peptide: MNQVLELQKLSYNEESGQPAVD - KDhbPDhbDhbFDhbDhbDhbDhbDhbIDhbDhbLDhaDhbVDhaQNC

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

Lanthipeptides

Core peptide predictions

ctg13_49 - Class III

Cleavage pHMM score: 2.60

RODEO score: 0

Monoisotopic mass: 2098.1 Da

Molecular weight: 2099.3 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 2117.3 Da N = 1; 2135.3 Da N = 2; 2153.4 Da N = 3; 2171.4 Da N = 4; 2189.4 Da N = 5; 2207.4 Da N = 6; 2225.4 Da N = 7; 2243.5 Da N = 8; 2261.5 Da N = 9; 2279.5 Da N = 10; 2297.5 Da N = 11; 2315.5 Da N = 12

ctg13_50 - Class III

Cleavage pHMM score: 2.60

RODEO score: 0

Monoisotopic mass: 2112.2 Da

Molecular weight: 2113.3 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 2131.4 Da N = 1; 2149.4 Da N = 2; 2167.4 Da N = 3; 2185.4 Da N = 4; 2203.4 Da N = 5; 2221.5 Da N = 6; 2239.5 Da N = 7; 2257.5 Da N = 8; 2275.5 Da N = 9; 2293.5 Da N = 10; 2311.6 Da N = 11; 2329.6 Da N = 12

NPCF01000059.1 - Region 1 - T3PKS

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Location: 22,708 - 63,808 nt. (total: 41,101 nt) Show pHMM detection rules used

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

NPCF01000080.1 - Region 1 - lanthipeptide-class-i

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Location: 38,931 - 63,438 nt. (total: 24,508 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

Lanthipeptides

Core peptide predictions

No core peptides found.

NPCF01000113.1 - Region 1 - siderophore

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Location: 1 - 9,341 nt. (total: 9,341 nt) Show pHMM detection rules used

Region on contig edge.

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.