GCA_002272605.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NPBX01000001.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	ectoine,lanthipeptide-class-iii	40,429	64,192	ectoine	Other	75%

NPBX01000048.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 40.1	T3PKS	1	39,213

NPBX01000072.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 63.1	lanthipeptide-class-i	39,336	63,843	chejuenolide A / chejuenolide B	Polyketide	7%

NPBX01000120.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 110.1	siderophore	13,400	21,029

No secondary metabolite regions were found in these records:: NPBX01000002.1; NPBX01000003.1; NPBX01000007.1; NPBX01000008.1; NPBX01000009.1; NPBX01000010.1; NPBX01000011.1; NPBX01000012.1; NPBX01000013.1; NPBX01000014.1; NPBX01000015.1; NPBX01000016.1; NPBX01000017.1; NPBX01000018.1; NPBX01000019.1; NPBX01000020.1; NPBX01000021.1; NPBX01000022.1; NPBX01000023.1; NPBX01000024.1; NPBX01000025.1; NPBX01000026.1; NPBX01000027.1; NPBX01000028.1; NPBX01000029.1; NPBX01000030.1; NPBX01000031.1; NPBX01000033.1; NPBX01000034.1; NPBX01000035.1; NPBX01000036.1; NPBX01000037.1; NPBX01000038.1; NPBX01000040.1; NPBX01000042.1; NPBX01000043.1; NPBX01000046.1; NPBX01000047.1; NPBX01000049.1; NPBX01000050.1; NPBX01000051.1; NPBX01000052.1; NPBX01000053.1; NPBX01000055.1; NPBX01000056.1; NPBX01000057.1; NPBX01000058.1; NPBX01000059.1; NPBX01000060.1; NPBX01000061.1; NPBX01000062.1; NPBX01000063.1; NPBX01000064.1; NPBX01000065.1; NPBX01000066.1; NPBX01000067.1; NPBX01000068.1; NPBX01000069.1; NPBX01000070.1; NPBX01000071.1; NPBX01000073.1; NPBX01000074.1; NPBX01000075.1; NPBX01000076.1; NPBX01000077.1; NPBX01000078.1; NPBX01000079.1; NPBX01000080.1; NPBX01000081.1; NPBX01000082.1; NPBX01000083.1; NPBX01000084.1; NPBX01000085.1; NPBX01000086.1; NPBX01000088.1; NPBX01000089.1; NPBX01000090.1; NPBX01000091.1; NPBX01000092.1; NPBX01000093.1; NPBX01000094.1; NPBX01000095.1; NPBX01000096.1; NPBX01000097.1; NPBX01000098.1; NPBX01000099.1; NPBX01000100.1; NPBX01000101.1; NPBX01000102.1; NPBX01000103.1; NPBX01000104.1; NPBX01000105.1; NPBX01000106.1; NPBX01000107.1; NPBX01000108.1; NPBX01000109.1; NPBX01000110.1; NPBX01000111.1; NPBX01000112.1; NPBX01000113.1; NPBX01000114.1; NPBX01000115.1; NPBX01000116.1; NPBX01000117.1; NPBX01000118.1; NPBX01000119.1; NPBX01000121.1; NPBX01000122.1; NPBX01000123.1; NPBX01000124.1; NPBX01000125.1; NPBX01000126.1; NPBX01000127.1; NPBX01000128.1; NPBX01000129.1; NPBX01000130.1; NPBX01000131.1; NPBX01000132.1; NPBX01000133.1; NPBX01000134.1; NPBX01000135.1

Compact view

NPBX01000001.1 - Region 1 - ectoine,lanthipeptide-class-iii

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Location: 40,429 - 64,192 nt. (total: 23,764 nt) Show pHMM detection rules used

ectoine: ectoine_synt
lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg1_49 - Putative Class III

ctg1_50 leader / core peptide: MNQVLELQKLSYNEESGQPAVD - KDhbPDhbDhbFDhbDhbDhbDhbDhbIDhbDhbLDhaDhbVDhaNNC
ctg1_51 leader / core peptide: MNQVLELQKLSYNEESGQPAVD - KDhbPDhbDhbFDhbDhbDhbDhbDhbIDhbDhbLDhaDhbVDhaQNC

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

Lanthipeptides

Core peptide predictions

ctg1_50 - Class III

Cleavage pHMM score: 2.60

RODEO score: 0

Monoisotopic mass: 2098.1 Da

Molecular weight: 2099.3 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 2117.3 Da N = 1; 2135.3 Da N = 2; 2153.4 Da N = 3; 2171.4 Da N = 4; 2189.4 Da N = 5; 2207.4 Da N = 6; 2225.4 Da N = 7; 2243.5 Da N = 8; 2261.5 Da N = 9; 2279.5 Da N = 10; 2297.5 Da N = 11; 2315.5 Da N = 12

ctg1_51 - Class III

Cleavage pHMM score: 2.60

RODEO score: 0

Monoisotopic mass: 2112.2 Da

Molecular weight: 2113.3 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 2131.4 Da N = 1; 2149.4 Da N = 2; 2167.4 Da N = 3; 2185.4 Da N = 4; 2203.4 Da N = 5; 2221.5 Da N = 6; 2239.5 Da N = 7; 2257.5 Da N = 8; 2275.5 Da N = 9; 2293.5 Da N = 10; 2311.6 Da N = 11; 2329.6 Da N = 12

NPBX01000048.1 - Region 1 - T3PKS

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Location: 1 - 39,213 nt. (total: 39,213 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.

NPBX01000072.1 - Region 1 - lanthipeptide-class-i

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Location: 39,336 - 63,843 nt. (total: 24,508 nt) Show pHMM detection rules used

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptides - No core peptides found.

Similar known gene clusters

Lanthipeptides

Core peptide predictions

No core peptides found.

NPBX01000120.1 - Region 1 - siderophore

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Location: 13,400 - 21,029 nt. (total: 7,630 nt) Show pHMM detection rules used

Region on contig edge.

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.