GCA_002272655.1 - 4 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

NPMP01000032.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 30.1	ectoine,lanthipeptide-class-iii	1	22,946	ectoine	Other	75%

NPMP01000038.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 35.1	siderophore	1	11,064

NPMP01000073.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 70.1	lanthipeptide-class-i	1	17,830

NPMP01000115.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 109.1	T3PKS	1	14,793

No secondary metabolite regions were found in these records:: NPMP01000001.1; NPMP01000002.1; NPMP01000003.1; NPMP01000004.1; NPMP01000005.1; NPMP01000006.1; NPMP01000007.1; NPMP01000008.1; NPMP01000009.1; NPMP01000010.1; NPMP01000011.1; NPMP01000012.1; NPMP01000013.1; NPMP01000014.1; NPMP01000016.1; NPMP01000018.1; NPMP01000019.1; NPMP01000020.1; NPMP01000021.1; NPMP01000022.1; NPMP01000023.1; NPMP01000024.1; NPMP01000025.1; NPMP01000026.1; NPMP01000027.1; NPMP01000028.1; NPMP01000029.1; NPMP01000030.1; NPMP01000031.1; NPMP01000033.1; NPMP01000034.1; NPMP01000035.1; NPMP01000037.1; NPMP01000039.1; NPMP01000040.1; NPMP01000041.1; NPMP01000042.1; NPMP01000043.1; NPMP01000044.1; NPMP01000045.1; NPMP01000046.1; NPMP01000047.1; NPMP01000048.1; NPMP01000049.1; NPMP01000050.1; NPMP01000051.1; NPMP01000052.1; NPMP01000053.1; NPMP01000054.1; NPMP01000055.1; NPMP01000056.1; NPMP01000057.1; NPMP01000058.1; NPMP01000059.1; NPMP01000060.1; NPMP01000061.1; NPMP01000062.1; NPMP01000063.1; NPMP01000064.1; NPMP01000065.1; NPMP01000066.1; NPMP01000067.1; NPMP01000068.1; NPMP01000069.1; NPMP01000070.1; NPMP01000071.1; NPMP01000072.1; NPMP01000074.1; NPMP01000075.1; NPMP01000076.1; NPMP01000077.1; NPMP01000078.1; NPMP01000079.1; NPMP01000080.1; NPMP01000081.1; NPMP01000082.1; NPMP01000083.1; NPMP01000084.1; NPMP01000085.1; NPMP01000086.1; NPMP01000087.1; NPMP01000089.1; NPMP01000090.1; NPMP01000091.1; NPMP01000092.1; NPMP01000093.1; NPMP01000094.1; NPMP01000095.1; NPMP01000096.1; NPMP01000097.1; NPMP01000098.1; NPMP01000099.1; NPMP01000100.1; NPMP01000101.1; NPMP01000102.1; NPMP01000103.1; NPMP01000104.1; NPMP01000106.1; NPMP01000107.1; NPMP01000109.1; NPMP01000110.1; NPMP01000111.1; NPMP01000112.1; NPMP01000113.1; NPMP01000114.1; NPMP01000116.1; NPMP01000117.1; NPMP01000118.1; NPMP01000119.1; NPMP01000120.1; NPMP01000121.1; NPMP01000122.1; NPMP01000123.1; NPMP01000124.1; NPMP01000125.1; NPMP01000126.1; NPMP01000127.1; NPMP01000128.1; NPMP01000129.1; NPMP01000130.1

Compact view

NPMP01000032.1 - Region 1 - ectoine,lanthipeptide-class-iii

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Location: 1 - 22,946 nt. (total: 22,946 nt) Show pHMM detection rules used

Region on contig edge.

ectoine: ectoine_synt
lanthipeptide-class-iii: (micKC and not PKS_KS)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg30_12 - Putative Class III

allorf_13313_13456 leader / core peptide: VKKMNQVLELQKLSYNEESGQPAVD - KDhbPDhbDhbFDhbDhbDhbDhbDhbIDhbDhbLDhaDhbVDhaQNC

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

Lanthipeptides

Core peptide predictions

allorf_13313_13456 - Class III

Cleavage pHMM score: 2.60

RODEO score: 0

Monoisotopic mass: 2112.2 Da

Molecular weight: 2113.3 Da

Number of bridges: 1

Alternative weights: (assuming N unmodified Ser/Thr residues); 2131.4 Da N = 1; 2149.4 Da N = 2; 2167.4 Da N = 3; 2185.4 Da N = 4; 2203.4 Da N = 5; 2221.5 Da N = 6; 2239.5 Da N = 7; 2257.5 Da N = 8; 2275.5 Da N = 9; 2293.5 Da N = 10; 2311.6 Da N = 11; 2329.6 Da N = 12

NPMP01000038.1 - Region 1 - siderophore

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Location: 1 - 11,064 nt. (total: 11,064 nt) Show pHMM detection rules used

Region on contig edge.

siderophore: IucA_IucC

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

NPMP01000073.1 - Region 1 - lanthipeptide-class-i

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Location: 1 - 17,830 nt. (total: 17,830 nt) Show pHMM detection rules used

Region on contig edge.

lanthipeptide-class-i: ((LANC_like and (Lant_dehydr_N or Lant_dehydr_C)) and not (YcaO or TIGR03882))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

Select a gene to view the details available for it

Lanthipeptides

KnownClusterBlast

Lanthipeptide predictions

Lanthipeptide(s) for ctg70_7 - Putative Class I

ctg70_8 leader / core peptide: MEKAFDLDLEVVHTKAKDVQPD - FDhbDhaVDhaFCDhbPGCGEDhbGDhaFNDhaFCC

Legend:

Dha: Didehydroalanine
Dhb: Didehydrobutyrine

Similar known gene clusters

No matches found.

Lanthipeptides

Core peptide predictions

ctg70_8 - Class I

Cleavage pHMM score: 8.10

RODEO score: 32

Monoisotopic mass: 2107.9 Da

Molecular weight: 2109.4 Da

Number of bridges: 3

Additional modifications: AviCys

Alternative weights: (assuming N unmodified Ser/Thr residues); 2127.4 Da N = 1; 2145.4 Da N = 2; 2163.4 Da N = 3

NPMP01000115.1 - Region 1 - T3PKS

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Location: 1 - 14,793 nt. (total: 14,793 nt) Show pHMM detection rules used

Region on contig edge.

T3PKS: (Chal_sti_synt_C or Chal_sti_synt_N)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

reset view

zoom to selection

Gene details

Select a gene to view the details available for it

KnownClusterBlast

Similar known gene clusters

No matches found.