GCA_002849935.1 - 2 region(s) - antiSMASH results

Identified secondary metabolite regions using strictness 'relaxed'

CP015496.1

Region	Type	From	To	Most similar known cluster		Similarity
Region 1.1	arylpolyene	399,137	439,922
Region 1.2	NRPS	1,595,688	1,638,552

Region	Type	From	To	Most similar known cluster	Similarity
Region 1.1	arylpolyene	399,137	439,922
Region 1.2	NRPS	1,595,688	1,638,552

No secondary metabolite regions were found in these records:: CP015497.1

Compact view

CP015496.1 - Region 1 - arylpolyene

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Location: 399,137 - 439,922 nt. (total: 40,786 nt) Show pHMM detection rules used

arylpolyene: (APE_KS1 or APE_KS2)

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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Gene details

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KnownClusterBlast

Similar known gene clusters

No matches found.

CP015496.1 - Region 2 - NRPS

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Location: 1,595,688 - 1,638,552 nt. (total: 42,865 nt) Show pHMM detection rules used

NRPS: cds(Condensation and (AMP-binding or A-OX))

Legend:

core biosynthetic genes

additional biosynthetic genes

transport-related genes

regulatory genes

other genes

resistance

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zoom to selection

Gene details

Select a gene to view the details available for it

NRPS/PKS domains

KnownClusterBlast

Detailed domain annotation

Selected features only

Show module domains

Similar known gene clusters

No matches found.

NRPS/PKS products

NRPS/PKS monomers

Predicted core structure(s)

For candidate cluster 2, location 1595687 - 1638552:

Rough prediction of core scaffold based on assumed PKS/NRPS colinearity; tailoring reactions not taken into account

Polymer prediction:: (tyr)

Direct lookup in NORINE database: strict or relaxed

Link to NORINE database query form

NRPS/PKS monomer predictions

ctg1_1741

Search NORINE for peptide: strict or relaxed

AMP-binding (8..390): tyr

NRPSPredictor2: tyr

SVM prediction details:

Predicted physicochemical class:: hydrophobic-aliphatic
Large clusters prediction:: N/A
Small clusters prediction:: tyr, bht
Single AA prediction:: tyr

Stachelhaus prediction details:

Stachelhaus sequence:: DvtSmAlVYK
Nearest Stachelhaus code:: val
Stachelhaus code match:: 60% (weak)